Gene DvMF_2939 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvMF_2939 
Symbol 
ID7174881 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris str. 'Miyazaki F' 
KingdomBacteria 
Replicon accessionNC_011769 
Strand+ 
Start bp3710745 
End bp3711716 
Gene Length972 bp 
Protein Length323 aa 
Translation table11 
GC content66% 
IMG OID643541472 
Productresponse regulator receiver modulated CheW protein 
Protein accessionYP_002437344 
Protein GI218888023 
COG category[K] Transcription
[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
[COG0835] Chemotaxis signal transduction protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones67 
Fosmid unclonability p-value0.112041 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCAGA CCAACATCCT GCTGGAATCG GGCACCAACG AGCTCGAAAT CATCGAATTC 
TACATCGAGG AAACCCTGCC GGGGGGCGGG GTGTACCGTG GCTACTACGG CATGAACGTG 
GCCAAGGTGC TGGAGATCAT CCGCCGTCCC ACGGTCACCG GCGTGCCCAG CAAGCACCAT 
CCGGCGGCGC TGGGCACCTT CAACCTGCGT GGCCGGGTCC TGCCCCTGGT GGACCTGGGC 
GGGTGGCTGG GCAAGCAGGT GGCGGCCAGC GACGCCCTGA AGGTCATCGT GTCCGAGTTC 
AGCGGCATGG TCACCGCGTT CCTGGTGTCC GGGGTCACGC GCATCCATCG CCTGAGCTGG 
AGCCAGGTGG AGGCCCCCGA CATGCACATG CAGACCTACA GCGGCCAGTC GGTCATCGGG 
GTGGTGCGCT TCGAGGACCG CATCGTGTTC CTGCTGGACA TGGAAAAGAT CGTGGCGTCC 
ATGAACCCCC GGGCGGACAT CGGCGCGACG CTGGCGGCGG TGGAGCCGGT GGTGACGCAG 
GGCGAACAGT GGCACGTGCT CATCGCCGAC GATTCCTCGG CCATCCGCAA CATGATCGGC 
AGCACCCTGG AAAAGGCGGG CTTTCGCGTC ACCCGCACCA GCAGCGGGCG CGAGGCGTGG 
GACGTGCTGG TCGACTGGCG CAAGCGCTCG GAAGAAGAGC GCAAGCACAT TTACGACTAC 
GTGGACCTGG TGGTGTCGGA CATCGAGATG CCCGAGATGG ACGGCCACAA CCTGACCCGG 
CGCATCAAGG AAGACCAGGT GCTGCAAAAG CTGCCCGTGG TGCTGTTCTC TTCGCTGATC 
ACCGACGCCC TGCGCCACAA GGGCGCCGCC GTGGGGGCCG ACGACCAGAT ATCCAAGCCC 
GACCTGCCCG GCCTTACCGA ACGGGTGCGC GGCCTTATCG AGCGGTTCCG CCAGGAGGCC 
AGCGCCGCGT AG
 
Protein sequence
MSQTNILLES GTNELEIIEF YIEETLPGGG VYRGYYGMNV AKVLEIIRRP TVTGVPSKHH 
PAALGTFNLR GRVLPLVDLG GWLGKQVAAS DALKVIVSEF SGMVTAFLVS GVTRIHRLSW 
SQVEAPDMHM QTYSGQSVIG VVRFEDRIVF LLDMEKIVAS MNPRADIGAT LAAVEPVVTQ 
GEQWHVLIAD DSSAIRNMIG STLEKAGFRV TRTSSGREAW DVLVDWRKRS EEERKHIYDY 
VDLVVSDIEM PEMDGHNLTR RIKEDQVLQK LPVVLFSSLI TDALRHKGAA VGADDQISKP 
DLPGLTERVR GLIERFRQEA SAA