| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_2937 |
|---|
| Symbol | |
|---|
| ID | 7174879 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011769 |
|---|
| Strand | + |
|---|
| Start bp | 3708736 |
|---|
| End bp | 3709581 |
|---|
| Gene Length | 846 bp |
|---|
| Protein Length | 281 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 643541470 |
|---|
| Product | endonuclease III |
|---|
| Protein accession | YP_002437342 |
|---|
| Protein GI | 218888021 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0177] Predicted EndoIII-related endonuclease |
|---|
| TIGRFAM ID | [TIGR01083] endonuclease III |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 70 |
|---|
| Fosmid unclonability p-value | 0.206628 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGACCG CCGACCGCGC GGCCAGGGTG CTCGAACTCC TGCGCCTGCG TTACCCCACC
CGCGAAACGC ATCTGGTGGC CCAGAACGCC TGGGAACTGC TGGTGGCCAC GGTGCTGGCC
GCCCAGTGCA CCGACGTGCG CGTGAACCAG GTCACCCCCG GCCTGTTCAG CCGTTGGCCC
GGCCCGGCAG AGCTTGCCCG CGCCACGCAG GAGGAACTGG AAGAGGTCAT CCACTCCACA
GGGTTCTACC GCAACAAGGC CACCAACCTG CTGGGCGCGG CCCGTCGCGT GACCGACGTG
CACGGCGGCG AGGTGCCCCG CACCATGGCC GAACTGGTGC AGCTGCCGGG CGTGGCCCGC
AAGACGGCCA ACGTGGTGCT GTGGGGGGCC TACGGCATCA ACGAAGGCAT TGCCGTGGAC
ACCCACGTCA AGCGCATCGC TTTTCGCATG GGCTTTACCG AATCCGTGGA CCCGGTGCAG
ATAGAGCGCG ACCTGATGGA CCTTTTTCCG CGCGATGCCT GGGGCGACGT GAACCACATG
CTGGTGTGGT TTGGCCGCCA TGTGTGCGAT GCGCGCGCCC CGCGCTGCGG CGAATGCGAG
ATGATCGAGG TCTGTCCGCG CCACGGGGTG GGACAGAAGG AGGGCGCGGC CACCAAGGTC
CGGAAGCCCC GGAGCGGCAA GAGCGGCGGA AAAAGCGACG AGGCGGCGCA GGGGGTCGGA
AGTGAAGCCC GGCCCGAAGG AAAAGGGGCG GCGACCGGAT TTGGCAAACC CCGCAAGCCC
ACCATGGGTG GGCGACGGCG GGCTGGTAAC GTGGGGCGCT CCGGCAGCAG CGGCGGCAAG
CCATGA
|
|---|
| Protein sequence | MQTADRAARV LELLRLRYPT RETHLVAQNA WELLVATVLA AQCTDVRVNQ VTPGLFSRWP
GPAELARATQ EELEEVIHST GFYRNKATNL LGAARRVTDV HGGEVPRTMA ELVQLPGVAR
KTANVVLWGA YGINEGIAVD THVKRIAFRM GFTESVDPVQ IERDLMDLFP RDAWGDVNHM
LVWFGRHVCD ARAPRCGECE MIEVCPRHGV GQKEGAATKV RKPRSGKSGG KSDEAAQGVG
SEARPEGKGA ATGFGKPRKP TMGGRRRAGN VGRSGSSGGK P
|
|---|
| |