Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DvMF_2929 |
Symbol | |
ID | 7174871 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
Kingdom | Bacteria |
Replicon accession | NC_011769 |
Strand | - |
Start bp | 3700524 |
End bp | 3701315 |
Gene Length | 792 bp |
Protein Length | 263 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 643541462 |
Product | hydroxypyruvate isomerase |
Protein accession | YP_002437334 |
Protein GI | 218888013 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3622] Hydroxypyruvate isomerase |
TIGRFAM ID | [TIGR03234] hydroxypyruvate isomerase |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 75 |
Fosmid unclonability p-value | 0.452433 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCAGAT TCGCCGCCAA CCTGACCATG CTGTTCACCG AACTGCCGTT CACCGAACGT TTCGCCGCTG CGCGCTCGGC GGGCTTCGAC GCGGTGGAAT ACCTGTTCCC CTACGACCAC GCCCCGGAAA CGCTGGCCGC GCTGCTGCGC GACAACGGCC TGATCCAGGT GCTGTTCAAC CTGCCTGCGG GCGACTGGGC CGCCGGAGAA CGCGGCATAG CCGCCCTGCC GGGACGCGAG GCGGAATTCC GCGCCGGGGT GGACCGTGCC ATTGCCTACG CCAAGGCCCT TGGCGTGCCC CGGTTGAACT GCCTGGCGGG CAAGGTGCCG GACAACGACC CCGCCGCCGC GCAGGCCGCG TGGGCCACCC TGGTGGACAA CGTGCGCTTC GCCGCCGACC GGCTGGCCGA AGCCGGGCTG GTGCTGCTGG TGGAATTCAT CAATCGCAAG GACATTCCCG GCTTCTTCCT GCATTCCACC GCGCAGGTGC TGCGCCTGCT GGACGAGGTG GGCCGACCCA ACGTGCTGCT GCAGTACGAC GTCTACCATG CCCAGCGCGA GGAGGGCGAA CTGGCCGCCA CCCTGCGCGC CCACATGGAC CGCATCGGGC ACGTCCAGAT CGCGGACACG CCGGGCCGCC ACCAGCCCGG CACCGGTGAA ATCAACTACC CTTTCCTGTT CGCCGAACTG GACCGCCTGG GCTACGCCGG GCACATCGGG CTGGAATACG TGCCCGCGCC CGGCACGCTG GCGTCGCTGG ACTGGATGCT TCCGTACACC ACGCAGGCAT GA
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Protein sequence | MPRFAANLTM LFTELPFTER FAAARSAGFD AVEYLFPYDH APETLAALLR DNGLIQVLFN LPAGDWAAGE RGIAALPGRE AEFRAGVDRA IAYAKALGVP RLNCLAGKVP DNDPAAAQAA WATLVDNVRF AADRLAEAGL VLLVEFINRK DIPGFFLHST AQVLRLLDEV GRPNVLLQYD VYHAQREEGE LAATLRAHMD RIGHVQIADT PGRHQPGTGE INYPFLFAEL DRLGYAGHIG LEYVPAPGTL ASLDWMLPYT TQA
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