Gene DvMF_2929 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvMF_2929 
Symbol 
ID7174871 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris str. 'Miyazaki F' 
KingdomBacteria 
Replicon accessionNC_011769 
Strand
Start bp3700524 
End bp3701315 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content69% 
IMG OID643541462 
Producthydroxypyruvate isomerase 
Protein accessionYP_002437334 
Protein GI218888013 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3622] Hydroxypyruvate isomerase 
TIGRFAM ID[TIGR03234] hydroxypyruvate isomerase 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones75 
Fosmid unclonability p-value0.452433 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCAGAT TCGCCGCCAA CCTGACCATG CTGTTCACCG AACTGCCGTT CACCGAACGT 
TTCGCCGCTG CGCGCTCGGC GGGCTTCGAC GCGGTGGAAT ACCTGTTCCC CTACGACCAC
GCCCCGGAAA CGCTGGCCGC GCTGCTGCGC GACAACGGCC TGATCCAGGT GCTGTTCAAC
CTGCCTGCGG GCGACTGGGC CGCCGGAGAA CGCGGCATAG CCGCCCTGCC GGGACGCGAG
GCGGAATTCC GCGCCGGGGT GGACCGTGCC ATTGCCTACG CCAAGGCCCT TGGCGTGCCC
CGGTTGAACT GCCTGGCGGG CAAGGTGCCG GACAACGACC CCGCCGCCGC GCAGGCCGCG
TGGGCCACCC TGGTGGACAA CGTGCGCTTC GCCGCCGACC GGCTGGCCGA AGCCGGGCTG
GTGCTGCTGG TGGAATTCAT CAATCGCAAG GACATTCCCG GCTTCTTCCT GCATTCCACC
GCGCAGGTGC TGCGCCTGCT GGACGAGGTG GGCCGACCCA ACGTGCTGCT GCAGTACGAC
GTCTACCATG CCCAGCGCGA GGAGGGCGAA CTGGCCGCCA CCCTGCGCGC CCACATGGAC
CGCATCGGGC ACGTCCAGAT CGCGGACACG CCGGGCCGCC ACCAGCCCGG CACCGGTGAA
ATCAACTACC CTTTCCTGTT CGCCGAACTG GACCGCCTGG GCTACGCCGG GCACATCGGG
CTGGAATACG TGCCCGCGCC CGGCACGCTG GCGTCGCTGG ACTGGATGCT TCCGTACACC
ACGCAGGCAT GA
 
Protein sequence
MPRFAANLTM LFTELPFTER FAAARSAGFD AVEYLFPYDH APETLAALLR DNGLIQVLFN 
LPAGDWAAGE RGIAALPGRE AEFRAGVDRA IAYAKALGVP RLNCLAGKVP DNDPAAAQAA
WATLVDNVRF AADRLAEAGL VLLVEFINRK DIPGFFLHST AQVLRLLDEV GRPNVLLQYD
VYHAQREEGE LAATLRAHMD RIGHVQIADT PGRHQPGTGE INYPFLFAEL DRLGYAGHIG
LEYVPAPGTL ASLDWMLPYT TQA