Gene DvMF_2922 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvMF_2922 
Symbol 
ID7174864 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris str. 'Miyazaki F' 
KingdomBacteria 
Replicon accessionNC_011769 
Strand- 
Start bp3692137 
End bp3693156 
Gene Length1020 bp 
Protein Length339 aa 
Translation table11 
GC content69% 
IMG OID643541455 
ProductNAD-dependent epimerase/dehydratase 
Protein accessionYP_002437327 
Protein GI218888006 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0451] Nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones74 
Fosmid unclonability p-value0.443287 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCATCC CCACTGATCC GCTTCGCACC TGCACGCCGA ACAGCCCCCC CGACGCCCCC 
GCCGGCCTCG GGGAACTTTC GGTCCTCGTC ACGGGCGCGG CAGGATTCAT CGGCATCAAT 
CTCGTCAAGG CGCTGGCCCC CCGGTGCCGC CGCCTGATAT GCTACGGCAG GCGCGCGCAG 
GAAATCCTGT CGCCGCTGGG CCTGCCGGGC ACGGAATGCC ATACCGGAGA AACCGGCGAC 
ATCGACCGGC TGGGGCCGCT GCTGCACGGG GTGGACCGGG TCATCCATCT TGCGTCCAGT 
TCCACGCCGG TCAATGCCGA CTGGGACCTT GTCACCGACG CCGAACAAAA CGTGCTGACC 
ACGCTGAAGC TGTTCCGCGC CTGCCTTGCG GCGGGCGTGG GCCGGGTGGT GTTCGTCTCT 
TCCGGCGGCA CCGTCTACGG GCCGGGCGCG GTGGTTCCCA CTCCGGAATC GGCCCCCACG 
GACCCCATAA CCGCATACGG CGTGGCCAAG GTGGCCATCG AAAAGTACCT GCACGTTTTC 
CGCCACCTGC ACCATCTCGA CTACCGCGTC CTGCGCGTGG CCAACCCCTA CGGGCCATAC 
CAGCTGGCCA CCAAGGGACA GGGCATCATC GGCGCGTTCA TCCGCAAGGC GCTTGCGGGG 
CAGCCGCTGG AAATCTGGGG TGACGGCAGC ACGGTGCGCG ACTACGTGTA CATCGACGAC 
CTGACCGACG CCCTGCTGCG CGCGGCGGTG CACGACGGAC CGGGCCGCGT GTTCAACGTG 
GGATCCGGAC GCGGCACCAC CATCAACGAG GTGGCTGACA CTCTGGAAGC AGTGCTTGGC 
CGCAGGCTGG AACGGTTGTA CCATCCCCCC CGGCCGGTGG ACGTGCCGGT TAGCGTGCTG 
GACTGCGCTG CGGCCTGGCG CGAAATGGGC TGGCGGGCAA CAACTCCGCT GGCCGACGGC 
ATGACGGACA CCCTGCGCTG GTTCACCCGG CACGTCACGC CGCCCGGGGC GTCCGCCTGA
 
Protein sequence
MSIPTDPLRT CTPNSPPDAP AGLGELSVLV TGAAGFIGIN LVKALAPRCR RLICYGRRAQ 
EILSPLGLPG TECHTGETGD IDRLGPLLHG VDRVIHLASS STPVNADWDL VTDAEQNVLT 
TLKLFRACLA AGVGRVVFVS SGGTVYGPGA VVPTPESAPT DPITAYGVAK VAIEKYLHVF 
RHLHHLDYRV LRVANPYGPY QLATKGQGII GAFIRKALAG QPLEIWGDGS TVRDYVYIDD 
LTDALLRAAV HDGPGRVFNV GSGRGTTINE VADTLEAVLG RRLERLYHPP RPVDVPVSVL 
DCAAAWREMG WRATTPLADG MTDTLRWFTR HVTPPGASA