| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_2905 |
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| Symbol | |
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| ID | 7174847 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011769 |
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| Strand | - |
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| Start bp | 3670950 |
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| End bp | 3673319 |
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| Gene Length | 2370 bp |
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| Protein Length | 789 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 643541438 |
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| Product | surface antigen (D15) |
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| Protein accession | YP_002437310 |
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| Protein GI | 218887989 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0729] Outer membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 62 |
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| Fosmid unclonability p-value | 0.0651948 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGTGCA TCCGCCTTCA TGCCGCCGTG GCGCGGTCCT TCTCCCATGC TCCGCCGCTG
CCGGGCCGGA GGCTGGCACT GGCGCTGCTC ACCACGCTGT TCCTGACGTT GACGGGCTGC
GCCGCACCGC GCAACGACGT GCCCTCCGCA CCCGGAACGT CTGCCCCCAC AGCCGTTCGC
AACGCCGACC CCAGCGCCCT CGAGGCCACC CGCGCGCTTG ACGCCGTGGC CCCGCCGCGC
ACCCCGCCCG GACTGTGCCC CCCCGCCATG GCAGACGCCA CGGCTGCGCC CCGCCCCCGG
AAAGCTGCGC CGGGCACGGC ACCCGGCCAA CCGCCGAGCC AGCCTTCGGA AAACGTGGCC
TACCGGGTCT CCTTCATCAT CGCGCCGACG GGCAGTGCTT CCGACGGCAG TGGCCCCCAT
GGCGATCCCC CCCATGGCGT CCTCCCCCAT GAGAGCCTTC CTGACACGCC CCCGGCATCC
CGGCCCGATC CCGGCGCGGA CGATCGGGAG CTGCTGGACG CGACGCGCAA CGCCAGCCTG
CTGCAACGCC TTGCCGACAC CCCTCCCGAA AGCATGACCG GCCTGCGACG CCGCATGCTG
GCCGACGAGC AGGAAGCGGT GAAGGTGCTG CGCGCCCACG GGTACTACGC GGGCACGGCG
GCGGGCAGCA TCGACGACGG CGCATCGCCC GTGGCCGTCA GGCTGGAACT GCGGCCCGGC
CCGCGCTACG TGGTGGGCGC GACGCACATT CGCATCGTGG ACGGCGTGTC TTCCCTCGCC
ACGGAATTTG CACCCGCGCC GCCGCGCACC CTGGCCGAGG TGGGCCTTGC CTCCGGCGCG
CCCGCCATAT CCGACGCCGT TCTGGATGCC GTGGGGCGCG TGCCGGTCGC CCTGCGCGAC
ACGGGCTACC CCTTCGCGCG GGTGGCATCC GCCCGGTACG AGGTGGACCA TGCCGCGCGC
ACCCTGGACG CCACCGTGGA CGTGGTGGCG GGGCTGCCCA CCCGCATGGG GCCACCGCAA
ATCAACGGCG CCCGCACGGT GCGCCCCGAA TGGCTGGAAT CCATGGCGGA CTGGCAGGCG
GGCCAGCCGT GGGACGAACG GACGGTAGAG CGCTACCGTG AACGGCTGCG CGCCACCGGG
CTGTTCAGTG CGGTCAGCGC CGGGGCCGTG CCCGCGCCGG AATCCGCCAC GGCTACGGAC
GCCCACGCCG CGTCCGACAC CGCGCCCGAC ACCGGGACGG CCCTGCCGCC CGGCACCCGC
CCCGACGCCG CCTACACCAG CCCGGTGCGG GTGGAGGTGA CCGAAGGCCC GCAACGCACC
GTGGGCGGCG GCCTGCGCTA CGATTCCACC CTGGGCCCCG GCGTGCTGGC CTTCTGGGAA
CACCGCAACC TGCTGGGCGA AGGAGAACGG CTGCGGCTGG AACTGCCGGT CTGGGACAAG
CGGCAAGAGG GCAAGGCCAG CTTCCGCAAG CCGTCCTTCC TGCGGCCCGA CCAGGAACTG
CTGGCCGAAA GCTGGGTGCG CAACGAAACG TCCGACGCCT ACGACCAGCA GGCCGCCTTT
GCCTCCGTTG GTCTGGCGCG CGACCTGGCC CCCGGCTGGC GGGCCGGGGT CGGCGTGTCC
ACCGAGGGTG GCCGCATAGA GGACGCGGGC GGTCCGGAGC GCTCGTACAC CATGTGGGGG
CTGCCGCTTT CGCTGCGCCG CGACGCCACC GACGACCTGC TGGACCCGAC GCGCGGCACA
CGGGCCGACC TTTCCGTCAC CCCCTACACC GGGGTCTACG ACGAACCGTT CAACGTGGTG
CGTTCGCGGC TGGATGTCAG CGCCTATCAT GTCTTGCTGC GCGGCAAGGC ACACCGAGCG
GGGCAGGCCG ACAGGACCGA CAGGGGCGAC AACGGGCCCG ACGGTCACCC GGACGGTCTC
GCGGGCGGCT ACCCGGACGG TCCCGACGGA CGGCTGGTGC TGGCCGCCAG CGCGGCTGCC
GGGTCGCTGT CCGGGGCGTC CAGCGGCGCG GTGCCCGGCT CCATCCGCTT TTACGGCGGC
GGGGGCGGTT CTGTACGCGG CTATTCCTAC CAGTCCCTGG GCCCGCGCGA GGACGGCGAC
CCCATCGGCG GCTCCTCGTT CGGCGAGGCC AGCTTCGAAC TGCGCTACCG CATTTCCGAA
ACCCTGGGCA TCGTGCCCTT TCTGGACGGC GGCAACGTCT ACGAAGAAGA AACACCCCGC
TTCGGCGACG CCATGCGCTG GGGCGCGGGC ATCGGCGTGC GCTACTACAC CGTGGCAGGC
CCGCTGCGCT TCGACGTGGC CACCCCGCTG AACCCGCGCG AGGACGACGC CCCCCTGCAA
TTCTACATCA GCATCGGGCA GAGCTTCTGA
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| Protein sequence | MPCIRLHAAV ARSFSHAPPL PGRRLALALL TTLFLTLTGC AAPRNDVPSA PGTSAPTAVR
NADPSALEAT RALDAVAPPR TPPGLCPPAM ADATAAPRPR KAAPGTAPGQ PPSQPSENVA
YRVSFIIAPT GSASDGSGPH GDPPHGVLPH ESLPDTPPAS RPDPGADDRE LLDATRNASL
LQRLADTPPE SMTGLRRRML ADEQEAVKVL RAHGYYAGTA AGSIDDGASP VAVRLELRPG
PRYVVGATHI RIVDGVSSLA TEFAPAPPRT LAEVGLASGA PAISDAVLDA VGRVPVALRD
TGYPFARVAS ARYEVDHAAR TLDATVDVVA GLPTRMGPPQ INGARTVRPE WLESMADWQA
GQPWDERTVE RYRERLRATG LFSAVSAGAV PAPESATATD AHAASDTAPD TGTALPPGTR
PDAAYTSPVR VEVTEGPQRT VGGGLRYDST LGPGVLAFWE HRNLLGEGER LRLELPVWDK
RQEGKASFRK PSFLRPDQEL LAESWVRNET SDAYDQQAAF ASVGLARDLA PGWRAGVGVS
TEGGRIEDAG GPERSYTMWG LPLSLRRDAT DDLLDPTRGT RADLSVTPYT GVYDEPFNVV
RSRLDVSAYH VLLRGKAHRA GQADRTDRGD NGPDGHPDGL AGGYPDGPDG RLVLAASAAA
GSLSGASSGA VPGSIRFYGG GGGSVRGYSY QSLGPREDGD PIGGSSFGEA SFELRYRISE
TLGIVPFLDG GNVYEEETPR FGDAMRWGAG IGVRYYTVAG PLRFDVATPL NPREDDAPLQ
FYISIGQSF
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