| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_2898 |
|---|
| Symbol | |
|---|
| ID | 7174840 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011769 |
|---|
| Strand | - |
|---|
| Start bp | 3658581 |
|---|
| End bp | 3660065 |
|---|
| Gene Length | 1485 bp |
|---|
| Protein Length | 494 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 643541431 |
|---|
| Product | protein of unknown function UPF0027 |
|---|
| Protein accession | YP_002437303 |
|---|
| Protein GI | 218887982 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1690] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 71 |
|---|
| Fosmid unclonability p-value | 0.358598 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGACGCA CCACACACAA GAAGCACACC GGCAAACGGG GCTCGCAACC GTCCGCCGAC
GACTCCCGCC GGAAACGCGG CCAGGGGCGC ACATCCGGCG CGGCCCCGGC TGACCGCATG
GCCTACGCCA CCTGCACCGG GGTGCGCAAC GCGCCGCCGC GCCTGTCCCT GACCATTCCG
CCGGACCGGC TCGACGCCGC CACATGGGAG CAGATCGAAA GCGCCCTGGC CCTGCCCTGC
ATGGTGCACC TGGCCGTCAT GCCCGACGCC CACGCGGGCT ACGACCTGTG CATCGGCGGG
GTGGCCCTGC TGGACGGGCA CATCAGTCCC AGCTTCGTGG GCTACGACAT CGGCTGCGGC
ATGTGCCACG TGAACACCGG CCTGCCCGTG GACGAGGTGC TGCCCGACGA GGCCGCGCGG
CAACTGCTGC TCGACCGGCT GCGGCTGACC ATTCCCGTGG GCACCGCCAC CCGCGCCCCC
GGCGAATACG ACCTGCCGCG CTTCATCAGC GGCAGCGGCG ACACGCAACT GACCGACGCG
GTCAACGCGC GCCAGTCCAT CCAACTTGCT ACCCTGGGCG GGGGCAACCA CTTCCTCGAA
GTGGGGGTGA ACAAGCGGGG CGAAATCGGT GTTACCGTTC ATTCCGGCTC GCGCCGCTCC
GGCTGGGACA TCGGGGCCTG GTACATGAAG CAGGGCAGGC TGTTCCCGCT GGTTTCGCGC
CTTGGCCGCG CCTACCGGCA GGACATGGAC TGGGCGCTGG ACTATGCGCT ACTGAACCGC
CGCCTGATGC TGGAACACGC CCTGCGCGCA CTGGCCGACG TGCATCGGCA ACTGGCCCGG
CCCACAGGCA AACGCCCCGC CCGCCCCCCC AAGCCCACTG GGGATGCCGG AGCCACAGGC
CTCAACGGCC CATCCCATGC CCCGACTTCC CCGGCCCCTG CCGCCTCGAC AGACTTCCCC
CCCCCTGTCG TCTCCATCTC TCCCCTATCT GGGCAGAGCC TCGCAGCCAC CCCGATTCCC
TCTGCCCAGC CCCCGCTTTC CGAACAGGAA ATTTCCCTGC TGCTGGGCCG CATGGTCAAC
GAGAACCACA ACCACGCCGT GGTCCTGAAC CGGCTCGGGC CATCCGGAGC GCCGCTGGTG
CTGCACCGCA AGGGCGCAAC ACCGGCGGAT GCGGGACAGC CCGGCATCAT TCCCGCAAAT
CAGCGGGACG GGGTGTACGT CACGGTAGGG CTGGGCAACG AGGAATACCT GTCCTCGGCC
TCGCACGGAG CGGGGCGCCG CATGTCCCGC AACGAGGCGC AACGCACCAT ACCACTTGAA
AGATTCCGGT CGCAGATGCG CGGCATTGCC TGCCGTACCG ACAAGGGCGT GCTGGACGAG
GCCCCGGACG CCTACAAACC CATCGCGGAA GTGCTGGCCG CGCAGGACGG CGTGCTGGTG
CGGATCATCG ACCACTTCCG CCCGCTGGTG GTGCTGAAAG GGTGA
|
|---|
| Protein sequence | MGRTTHKKHT GKRGSQPSAD DSRRKRGQGR TSGAAPADRM AYATCTGVRN APPRLSLTIP
PDRLDAATWE QIESALALPC MVHLAVMPDA HAGYDLCIGG VALLDGHISP SFVGYDIGCG
MCHVNTGLPV DEVLPDEAAR QLLLDRLRLT IPVGTATRAP GEYDLPRFIS GSGDTQLTDA
VNARQSIQLA TLGGGNHFLE VGVNKRGEIG VTVHSGSRRS GWDIGAWYMK QGRLFPLVSR
LGRAYRQDMD WALDYALLNR RLMLEHALRA LADVHRQLAR PTGKRPARPP KPTGDAGATG
LNGPSHAPTS PAPAASTDFP PPVVSISPLS GQSLAATPIP SAQPPLSEQE ISLLLGRMVN
ENHNHAVVLN RLGPSGAPLV LHRKGATPAD AGQPGIIPAN QRDGVYVTVG LGNEEYLSSA
SHGAGRRMSR NEAQRTIPLE RFRSQMRGIA CRTDKGVLDE APDAYKPIAE VLAAQDGVLV
RIIDHFRPLV VLKG
|
|---|
| |