| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_2893 |
|---|
| Symbol | |
|---|
| ID | 7174835 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011769 |
|---|
| Strand | + |
|---|
| Start bp | 3650200 |
|---|
| End bp | 3652197 |
|---|
| Gene Length | 1998 bp |
|---|
| Protein Length | 665 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 643541426 |
|---|
| Product | adenylylsulfate reductase subunit alpha |
|---|
| Protein accession | YP_002437298 |
|---|
| Protein GI | 218887977 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
|---|
| TIGRFAM ID | [TIGR02061] adenosine phosphosulphate reductase, alpha subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 66 |
|---|
| Fosmid unclonability p-value | 0.127343 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGATGA TTCCCGTTAA GGAACAGCCG AAGGGTGTGG CCATCGCCGA TCCCATCGTG
AAGGAACATG ACGTCGACAT CCTCATCGTC GGCGGTGGTA TGGGCTCTTG CGGCACCGCG
TTCGAAGTCG TTCGCTGGGC CGACAAGTAC GCCCCCGACC TGAAGATCAT GCTGCTGGAC
AAGGCCACCC TCGAGCGTTC CGGCGCCGTT GCGCAGGGCC TGTCCGCCAT CAACACGTAC
CTCGGCAAGA ACCCCGCCGA CGACTACGTG CGCATGGTCC GCACCGACCT CATGGGCCTC
GTGCGCGAAG ACCTGATCTT CGACCTTGGC CGTCACGTTG ACGACTCCGT GCACCTGTTC
GAAGAGTGGG GCCTGCCCTG CTGGATCAAG GACGAACACG GCCACAACCT CGACGGCGCC
CAGGCCAAGG CCGCCGGCAA GTCGCTGCGC GCTGGCGACG ACCCCGTGCG TTCCGGTCGC
TGGCAGATCA TGATCAACGG TGAATCGTAC AAGTGCATCG TGGCCGAAGC GGCCAAGAAC
GCCCTTGGCG AAGCCCGCAT CATGGAACGT ATCTTCATCG TGAAGCTGCT GCTTGACGCC
AACACCGACA ACCGCATCGC TGGCGCCGTG GGCTTCAACC TGCGCGAAAA CGAAGTGCAC
ATCTTCCGTA CCAACGCGAT GATGGTTGCC TGCGGCGGCG CGGTGAACGT GTACAAGCCC
CGCTCCACTG GTGAAGGCAT GGGCCGCGCT TGGTACCCCG TGTGGAACGC CGGTTCGACC
TACACCATGT GTGCCCAGGT CGGCGCCGAA ATGACCATGA TGGAAAACCG CTTCGTGCCC
GCCCGCTTCA AGGACGGTTA CGGCCCGGTG GGCGCGTGGT TCCTGCTGTT CAAGGCGAAG
GCCACCAACT ACAAGGGTGA AGACTACTGC GCCACCAACC GTGCGATGCT GAAGCCCTAC
GAAGATCGCG GCTACGCCAA GGGTCACGTC ATTCCGACCT GCCTGCGTAA CCACATGATG
CTTCGTGAAA TGCGCGAAGG TCGCGGTCCC ATCTACATGG ACACCAAGAC CGCCCTGCAG
AACACCTTCG CCACCATGAC CCCCGAGCAG CAGAAGCACC TCGAGTCCGA AGCCTGGGAA
GACTTCCTCG ACATGTGCGT GGGGCAGGCC AACCTGTGGG CGTCCATGAA CATCCAGCCC
GAAGAACGCG GCTCGGAAAT CATGCCCACC GAACCTTACC TGCTCGGCTC GCACTCCGGC
TGCTGCGGTA TCTGGGTGTC CGGTCCGGAC GAAGCCTGGG TGCCCGAAGA CTACAAGGTG
CGCGCTGACA ACGGCAAGGT CTACAACCGC ATGACCACCG TGATGGGCCT GTGGACCTGC
GCCGACGGCG TGGGCGCTTC CGGCCACAAG TTCTCCTCCG GTTCGCACGC CGAAGGCCGT
ATCTGCGGCA AGCAGATGGT CCGCTGGTGC ATCGACCACA AGGACTTCAA GCCCGCCATC
AAGGAAACGG CTGAAGAGCT GAAGCAGCTC ATCTACCGTC CTTACTACAA CTACCTGGCC
GGCAAGGACG CCTCCACCGA CCCGGTGGTG AACCCGACCT ACATCAGCCC CAAGAACTTC
ATGATGCGCC TCGTGAAGTG CACCGACGAA TACGGCGGTG GTTGCGGTAC CTACTACACC
ACCTCCGCTG CGGCGCTGGA CACCGGCTTC GCGCTCATGG ACATGATGGA AGAAGACTCC
CTCAAGCTGG CCGCTCGCGA CCTGCACGAA CTGCTGCGCT GCTGGGAAAA CTACCACCGT
CTGTGGACCG TGCGCCTGCA CATGCAGCAC ATCCGCTTCC GTGAAGAGTC CCGTTACCCC
GGCTTCTACT ACCGAGCCGA CTTCATGGGC CTCGACGACT CCAAGTGGAA GTGCTTCGTG
AACTCGAAGC ATGATCCCAA GAAGGGCGAA ACGAAGATCT TCAAGAAGCC CTACTACCAG
ATCATTCCCA CCGAATAG
|
|---|
| Protein sequence | MPMIPVKEQP KGVAIADPIV KEHDVDILIV GGGMGSCGTA FEVVRWADKY APDLKIMLLD
KATLERSGAV AQGLSAINTY LGKNPADDYV RMVRTDLMGL VREDLIFDLG RHVDDSVHLF
EEWGLPCWIK DEHGHNLDGA QAKAAGKSLR AGDDPVRSGR WQIMINGESY KCIVAEAAKN
ALGEARIMER IFIVKLLLDA NTDNRIAGAV GFNLRENEVH IFRTNAMMVA CGGAVNVYKP
RSTGEGMGRA WYPVWNAGST YTMCAQVGAE MTMMENRFVP ARFKDGYGPV GAWFLLFKAK
ATNYKGEDYC ATNRAMLKPY EDRGYAKGHV IPTCLRNHMM LREMREGRGP IYMDTKTALQ
NTFATMTPEQ QKHLESEAWE DFLDMCVGQA NLWASMNIQP EERGSEIMPT EPYLLGSHSG
CCGIWVSGPD EAWVPEDYKV RADNGKVYNR MTTVMGLWTC ADGVGASGHK FSSGSHAEGR
ICGKQMVRWC IDHKDFKPAI KETAEELKQL IYRPYYNYLA GKDASTDPVV NPTYISPKNF
MMRLVKCTDE YGGGCGTYYT TSAAALDTGF ALMDMMEEDS LKLAARDLHE LLRCWENYHR
LWTVRLHMQH IRFREESRYP GFYYRADFMG LDDSKWKCFV NSKHDPKKGE TKIFKKPYYQ
IIPTE
|
|---|
| |