| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_2885 |
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| Symbol | |
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| ID | 7174827 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011769 |
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| Strand | - |
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| Start bp | 3641983 |
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| End bp | 3642615 |
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| Gene Length | 633 bp |
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| Protein Length | 210 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 643541418 |
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| Product | 16S rRNA processing protein RimM |
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| Protein accession | YP_002437290 |
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| Protein GI | 218887969 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0806] RimM protein, required for 16S rRNA processing |
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| TIGRFAM ID | [TIGR02273] 16S rRNA processing protein RimM |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 76 |
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| Fosmid unclonability p-value | 0.524407 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCGACG ACTCCTTCAT CGAAATCGGC CTCGTCGGCA GGCCCCACGG CCTGCGCGGC
GAAGTGGGCG TGGACTTCTG GGCCGAATCG CCCGACCTTC TGCGCGGCAC CCTGTGGCTG
CGTCCGGGGC GCGGCGCGCC CCGCCCCCAC ACGGTGGCCG CCGTGCGGCG CCATCAGGGC
CGCCCGCTGG TGCTGTTCGA AGGCATCGCC GACCGCAGCG CGGCGGAAAC CCTGCGCGGC
ATGCACGTGC TGGTGCCCAA GGACCGCCTG CCCGAACCCG CCGAGGACGA GGTGTACCTG
CACGAACTGC TGGGCCTGCG CGTGCTGCTG CACGACACGG GCGCGGCGCT GGGCACCCTG
GACGACGTGC AGATGCCCGG CGGGCAGGAG GTGTGGTCCA TCCGCACCGC CGACGGCAAG
GAAGTGCTGC TGCCTGCCGT GGAGGAATTC GTGGCCTCCA TCGACCTCGA CGCGCGCGAG
GTGCGCATCA CCCCGCCGCC GGGGCTGATG GAACTGTACC TGGAGGCGCC GGAAAAATCC
GCCGCCCGCA AGCCTGATGC GGATGCCACC GGACCGGACG AGGCCGGGGA GTCCGCAGGC
ACCTGGAATC CAGCAGGATC GGGCGGCGCG TAG
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| Protein sequence | MSDDSFIEIG LVGRPHGLRG EVGVDFWAES PDLLRGTLWL RPGRGAPRPH TVAAVRRHQG
RPLVLFEGIA DRSAAETLRG MHVLVPKDRL PEPAEDEVYL HELLGLRVLL HDTGAALGTL
DDVQMPGGQE VWSIRTADGK EVLLPAVEEF VASIDLDARE VRITPPPGLM ELYLEAPEKS
AARKPDADAT GPDEAGESAG TWNPAGSGGA
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