| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_2884 |
|---|
| Symbol | |
|---|
| ID | 7174826 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011769 |
|---|
| Strand | - |
|---|
| Start bp | 3640671 |
|---|
| End bp | 3641966 |
|---|
| Gene Length | 1296 bp |
|---|
| Protein Length | 431 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 643541417 |
|---|
| Product | tRNA (guanine-N1)-methyltransferase |
|---|
| Protein accession | YP_002437289 |
|---|
| Protein GI | 218887968 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis
[S] Function unknown |
|---|
| COG ID | [COG0336] tRNA-(guanine-N1)-methyltransferase
[COG4752] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | [TIGR00088] tRNA (guanine-N1)-methyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 74 |
|---|
| Fosmid unclonability p-value | 0.471806 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCACTTCA CCCTGGTCAC CCTGTTCCCG GAATTCTTCG ACTCGCCCCT GTCCGCCGGG
CTCATGGCCA AGGCGCGCGA GTCGGGCACC GTGGACTTTT CCTTCCGCAA CCCGCGCGAC
GCCACCACCG ACCGGCACCG CACAGTGGAC GACCGCCCCT ACGGCGGCGG CCCCGGCATG
GTCATGCTGC CGGAACCGTT GGCCGTCACC CTGCGCGCCC TGCGTGAAGA CGCCCCCAGG
GCCCGCATCC TGATGATGGC CCCGCGCGGG CGGCGCTTCA CCCAGCAGAT GGCCCGCGAA
CTGGCCCGCG AAGAACACGT GGCCATCCTG TGCGGCCGCT ACGAAGGGTT CGACGCGCGC
ATCGAGGAAC TGTTCGACAT CGAGCCGGTG TGCGTGGGCG ATTTCGTGCT GAACGGCGGC
GAAACGGCGG CGCTGAACGT CATCGAAGCC GTGGCCCGGC TGGTGCCCGG CTTCATGGGC
AAGGAGGAAT CGGGCGAGGA CGAAAGCTTT TCCGACGGCC TGCTGGAATA CCCGCACTAC
ACCAGGCCGG AAGTGTTCGA GGGGCTGCCC GTGCCCGACG TGCTGCGCTC CGGCGACCAT
GGCCGCATCG CCGCGTGGCG GCGCGAGCAG TCGCTTGCCG CCACCCTGCG CCTGCGCCCG
GAGTTGCTGC CGGAAGCCCC GCTGACAGAA ACCGACATGA CCTTCCTGCG GCACAAGGCC
GCCGAGACCG TGGAACGGGC CGGACGCAAC CTGCATTGCG CCCTGGTGCA CTACCCGGTG
CTGAACAAGG AAAAAAAATC GGTGGCCGTG TCTTTGACAA ACCTCGACAT TCACGATATA
GGCCGCTGTT CCTGCACGTA TGGGCTTGGC GGGTATTACA TCGTAACACC CATCGAGGAC
CAGCGGCGGC TGCTCGACGG CATTCTCCGG CACTGGACGG AGGGTCCGGG CCTGGCGGCA
AACCCCGACA GGGGCGAGGC GCTCGGGCTG GTGCGCGGCG CCGATACGGT ACAGGAAGCG
GTGGACGACA TTACCCGCCG CACGGGCCAG CGCCCCCTGG TTATGGCAAC CAGTGCGCGC
GGCGCGGGCG ACACGACCGT CGGTCAGGTA AGGTCCATCC TCGCGGAACG CCCGGTGCTG
CTGTTGTTCG GCACCGGCCA CGGCTTGTCG CCGCATCTTG TGGCGGCGTG CGACGGCACC
CTGCGGCCCG TCCGGTGGAT GGACGGGTAC AACCACCTTT CGGTGCGCAC CGCCGCCGCC
ATCATCATGG ACAGGATTCT CGGCGACTGC TATTAG
|
|---|
| Protein sequence | MHFTLVTLFP EFFDSPLSAG LMAKARESGT VDFSFRNPRD ATTDRHRTVD DRPYGGGPGM
VMLPEPLAVT LRALREDAPR ARILMMAPRG RRFTQQMARE LAREEHVAIL CGRYEGFDAR
IEELFDIEPV CVGDFVLNGG ETAALNVIEA VARLVPGFMG KEESGEDESF SDGLLEYPHY
TRPEVFEGLP VPDVLRSGDH GRIAAWRREQ SLAATLRLRP ELLPEAPLTE TDMTFLRHKA
AETVERAGRN LHCALVHYPV LNKEKKSVAV SLTNLDIHDI GRCSCTYGLG GYYIVTPIED
QRRLLDGILR HWTEGPGLAA NPDRGEALGL VRGADTVQEA VDDITRRTGQ RPLVMATSAR
GAGDTTVGQV RSILAERPVL LLFGTGHGLS PHLVAACDGT LRPVRWMDGY NHLSVRTAAA
IIMDRILGDC Y
|
|---|
| |