| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_2877 |
|---|
| Symbol | |
|---|
| ID | 7174819 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011769 |
|---|
| Strand | - |
|---|
| Start bp | 3634888 |
|---|
| End bp | 3636663 |
|---|
| Gene Length | 1776 bp |
|---|
| Protein Length | 591 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 643541410 |
|---|
| Product | phosphoenolpyruvate-protein phosphotransferase |
|---|
| Protein accession | YP_002437282 |
|---|
| Protein GI | 218887961 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1080] Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) |
|---|
| TIGRFAM ID | [TIGR01417] phosphoenolpyruvate-protein phosphotransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 77 |
|---|
| Fosmid unclonability p-value | 0.945861 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGCGCGCG AGATCCTGCA AGGCATAGCC GTTTCGGCGG GCGTTTCCAT CGGCAAGGCG
TTCTTCACCA ACCGCCGCCG CAGAAGCGTC TCGTTCGAAA TCATTCCGCC CGGCGCGGCG
GATTCGGAGG TGGCCCGCCT GGAGCAGGCC GCCAGCGACG TGCGCGACGA CCTTGCCCGC
GCCCGCGACA ACGTGCCTGC CGAACTGCGC GACCACGCCG CGATCATCAA TTCGCACATG
ATGATCTGCC AGGATCCCAA GCTTATCCGC GCCGCCTCGC AGCGCATCCG CGACCATCAC
ATCTGCGCCG AATGGGCGCT GGACCAGGCT GTGGAGGCCA TTGCCGCCGC GTTCTCGGCC
ATCGAGGACC CGTACATCCG CGAACGCGTG CAGGACGTGC GCGCCGTGGC CGAACGCATC
CAGACCCGCC TGGTGGGCCG CCACGCCGAA CCGCTGCGCA CCCCGGACGA GCGCATCGTG
CTCATGGCCC ACGACCTGAC TCCGGCGGAC GCCATGGGCC TGCCCACGGT CAAGATCATG
TCCTTCGCCA CGGCGGAGGG CGGCAAGACC TCGCACACCG GCATTCTGGC GCGCAGCCTG
CAGATTCCCG CCGTGGTCGG CGTCTCGTCG CTGGAAGAAT CCGTGGCCGA CGGCGACCTG
GTCATCGTGG ACGCCCTGCG CGGCCTCATC GTGGTGGACC CGGACGAGAC GGAACTGGCC
GACTACACCG ACCTCAAGTA CCAGTTCGAA AACTATCAGA AGTCCATCCG CCGCCAGTCC
ACCCTGCCCG CGGAAACCCT GGACGGCTAC CGCATCGACG TGCAGGCCAA CATCGAACTG
GTGGAGGAAG TGCCCCAGGT GCTGGACGGC GGCGGCGACG GCGTGGGCCT GTACCGCACC
GAATACGCCT TCCTGAACCG CCGCACCTCG CCCACCGAGG AAGAACTGTA CGACGAGTAT
TCCCAGCTTG CCGGGCTGCT TTCGCCCCGG CGGGTGGTGT TCCGCACGCT GGACGTGGGC
GCGGACAAGA TGCTGTCCGA GCAGAGCCAG CTGGAAGAGC CCAACCCGGC CCTGGGGCTG
CGGGCCATCC GCTTCTGCCT GCGCCATCAG GACGTGTTCC GGCGGCAGTT GCGGGCCATC
CTGCGGGCCA GCGCGCACGG CTCCGCCTCG CTGCTGTTCC CCATGATCTC GGGGCTGCAC
GAACTGCGGC AGGCCAAGCA CATCCTGAAC GAGGTGCGGG CAGAACTGGA CGCGGCGGGC
CTGCCCTACG ACCCGGACAT GCCCGTGGGC ATCATGGTGG AGCTGCCGTC CGCCGTGATG
ATTTCCGAGG CGCTGGCGCA GGAAGTGGAC TTCTTCAGCA TCGGCACCAA CGACCTGATC
CAGTATTCGC TGGGCATCGA CCGGGGCAAC AAGCACGTCT CGTACCTGTA CCAGCCGCTG
CACCCGGCCA TCGTGCGGTC CATCAAGTAC GTGGTGGATT CTGCCCACCG CATGGGCATA
TCGGTGTGCG TGTGCGGCGA AGTGGCGTCC GACCCGTACT GCCTGCCCAT CCTGCTGGGC
ATGCAGATAG ACGCCATTTC CATCGCCCCG CAGGCCATAC CGGGCATCAA GCACATTCTG
CGGCGCACCA ACATGGAAGA GTGCAAGGAA CTCTTGCGCG ACGTGCTGAG TGCGTCCACC
GTCTCGACCA TCAACCGCAT GGTGAAGGAA ACGATCTACA ATCGCTTCCC GGAAGAACTG
ACGTTCTTCT CGTCCATGCT GGACCAGGAT GATTAG
|
|---|
| Protein sequence | MAREILQGIA VSAGVSIGKA FFTNRRRRSV SFEIIPPGAA DSEVARLEQA ASDVRDDLAR
ARDNVPAELR DHAAIINSHM MICQDPKLIR AASQRIRDHH ICAEWALDQA VEAIAAAFSA
IEDPYIRERV QDVRAVAERI QTRLVGRHAE PLRTPDERIV LMAHDLTPAD AMGLPTVKIM
SFATAEGGKT SHTGILARSL QIPAVVGVSS LEESVADGDL VIVDALRGLI VVDPDETELA
DYTDLKYQFE NYQKSIRRQS TLPAETLDGY RIDVQANIEL VEEVPQVLDG GGDGVGLYRT
EYAFLNRRTS PTEEELYDEY SQLAGLLSPR RVVFRTLDVG ADKMLSEQSQ LEEPNPALGL
RAIRFCLRHQ DVFRRQLRAI LRASAHGSAS LLFPMISGLH ELRQAKHILN EVRAELDAAG
LPYDPDMPVG IMVELPSAVM ISEALAQEVD FFSIGTNDLI QYSLGIDRGN KHVSYLYQPL
HPAIVRSIKY VVDSAHRMGI SVCVCGEVAS DPYCLPILLG MQIDAISIAP QAIPGIKHIL
RRTNMEECKE LLRDVLSAST VSTINRMVKE TIYNRFPEEL TFFSSMLDQD D
|
|---|
| |