Gene DvMF_2876 details

Gene Information

• Locus tag: DvMF_2876
• Symbol: smpB
• ID: 7174818
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Desulfovibrio vulgaris str. 'Miyazaki F'
• Kingdom: Bacteria
• Replicon accession: NC_011769
• Strand: -
• Start bp: 3633205
• End bp: 3633666
• Gene Length: 462 bp
• Protein Length: 153 aa
• Translation table: 11
• GC content: 64%
• IMG OID: 643541409
• Product: SsrA-binding protein
• Protein accession: YP_002437281
• Protein GI: 218887960
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0691] tmRNA-binding protein
• TIGRFAM ID: [TIGR00086] SsrA-binding protein

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 83
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGAGCAAGA AACCCTCTCC CGCCCTTATC GCCCAGAACA AGAAGGCCCG GCATCTCTAT 
GAACTCGACG ATTTCATGGA GGCAGGCCTC GTCCTGACCG GCTCGGAGGT CAAAAGCCTG 
CGCGCGGGCC ACGTGAACTT CCGCGACAGC TACGTGGATT TCCGCAACGG CGAAGCCTTT 
CTGGTAGGCC TGCACATTGC CCCGTACGAC AACGCGGGCT ACGCCCAGCA CGACCCCGAC 
CGCGACCGCA AGCTGCTGCT GCACGCCAAG CAGATCAACA CGCTGGCCCT GCGCGTGGCC 
CAGAAGGGCC TGACCGTGGT GCCGGTGAAC CTGCACTTCA GCAAGGGCCG GGTGAAGGTG 
GAAATAGCCG TGGGGCGCGG CAAGAAGCTG CACGACCAGC GCGAGGACCT GAAGAAGCGC 
GCCGCCGATC GGGATACCGA GCGCGAACTG GCCCGGTTCT AG 

 

Protein sequence

MSKKPSPALI AQNKKARHLY ELDDFMEAGL VLTGSEVKSL RAGHVNFRDS YVDFRNGEAF 
LVGLHIAPYD NAGYAQHDPD RDRKLLLHAK QINTLALRVA QKGLTVVPVN LHFSKGRVKV 
EIAVGRGKKL HDQREDLKKR AADRDTEREL ARF