| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_2863 |
|---|
| Symbol | |
|---|
| ID | 7174804 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011769 |
|---|
| Strand | - |
|---|
| Start bp | 3614393 |
|---|
| End bp | 3616528 |
|---|
| Gene Length | 2136 bp |
|---|
| Protein Length | 711 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 643541395 |
|---|
| Product | AsmA family protein |
|---|
| Protein accession | YP_002437268 |
|---|
| Protein GI | 218887947 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG2982] Uncharacterized protein involved in outer membrane biogenesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 83 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACAGAA CGCTCAAACT CGTGGCCGCC GCCATCGGCG CCCTGGTCAT CCTTGCCGCC
GCGGCCATCG CCATCGTGGT GGCCACCATC AATCCCAACG ACTACAAGGG CCGCATCGCG
GACGCCGCGC GCTCTGCCAC GGGTCGCGAA CTGGTCTTCG ACGGCGACCT TTCGCTGTCC
TTCTTCCCGT GGCTGGGGGT GGCCTTCGGC CCCATGCACC TCGGCAATCC GCCGGACTTC
CCCAAGGCTG GCGCCCCGTC CGCCGCATCG GGAGACGATG ACATCTTCCT GAGCATCAAG
GGCGGCGGGC TGCGCGTGGC CTTCATGCCC CTGCTGTCCA AGCGGGTGGA GGTGGCGGAA
CTGATGCTGG ACGGGCTGTA CCTGAACCTG GTGCGCGCCG CCGATGGCCG CACCAACTGG
GACTTCGCCA AGCCCGGCCA GACCCCGGCG GCCACTGCGG CCCCCGCTCC CCAGTCCACG
CAGTCCGCGC AACCCGCGCA GCCATCGGCC TCCGGCGGCG CGCCCCTGGC CGTGGCCGTG
GACACCCTGT CCGTTAAGGG CGCCTCGCTG TCCTTCCGCG ACCTGGGCAC CGGGCAGCAG
TTCCGCGCCC GCGACCTGAA CGTCAACGTC AACGGCCTGG CCCCCGGCGG CGACCCCGCC
GACATCAGGC TTGCCGTGGC CATGTCCGGC CAGAAGCCGG ACATCGACGC GGATCTTTCC
CTCGCCGCCA GGGTGCAGTC CGATCTGGAC GGCTCGGTGC TGCGCATCGA CGGCCTGACC
GTCACCCTTA CCCCCAAGGG CGGCGTGGTG CCCGCCGGAA TCGGCAAGGT GGAACTGGCG
GGCGACCTGA CCGTGCACAC CGTGCCGCAG CGGGTGGACA TCGCCCGGCT GTCGCTGTCC
ACCCCCACCC TGAAGGTTGG CGCCAACGGC ACCGCCGCGC TCGGTGCGCA GTCGTTCGAG
GGGCTGGTCA CCCTGACCGG TTCGCCGCGC AAGGCGATGG AAGCGCTGGG CACCCCGATG
CGCACCGCCG ACCCCAAGGT GCTGGACGCG CTGGACCTGA AGCTGGATGT GCAGGCCGCG
CCCGCCAAGA TGGACGTGCG GTCCATCACC GGCAAGTTGG ACGACACCGC CATTCAGGGC
AAGGCATCCG CCGTGCCGGG CGCGGTGCAG GTGATCCGGG CGGAACTGGC GCTGGACGCC
ATCGACGTGG ACCGCTACCT GCCGCCGGAA GGGGACAAGG GCAAGGCGAC CGAAAAGGGC
GCGGCCCCGA CCACCGACAA GGGCGGCAAG GACGGCAAGG CGGCACCGCA GGACGGTACC
GCAGAGGCCA AGAAGAGCCT GCGAACCATC GATGCGGATG TCACCTTCAA GGCCGGACGG
CTGGTGGCCT CCAAGGTGCC CATGACCAAC GTGCTGGTGC ATCTGGTGGC CGACAAGGGG
CTGGTGCGCA TCAACCCGTT GCAGCTGAAC CTGGGCGGCG GCTCGATGAA CGGCGACATC
ACCGCCGACA CTCGCGCCGA GGCGACAAAG TCGCGCATCG TCACCACCGT GAAGGGGGTG
GAGGTGGGCG AACTGCAACA GGCCGCGCTG GGCAAGCGGC ACCTGTCGGC CCGCACCGAC
GTGAAGACCG ACCTCACCGC CACCGGCGAC GACTGGAACG CCGCCAAGCA TACCCTGGCG
GGCACGGCAT CGCTGGCCAT GACCCAGGGC ACCATCCACG GCTTCCAGAT CATCCCCGAA
GGCATCAAGG GCGCGGAATC CAAGCGGGCC GGGGCGTCGG GCCAGAAGTT CGACAGCCTT
ACCGCGTCCG TCCGCGCCGA CAAGGGTGTG GTCAGCAACA AGGACCTCAA GTTCGTTTCG
CCGGGCATCG GCGCCACGGG CGCGGGCACG GCCGACCTTG GCCGCAACGT GGTGGACTAC
GCCGCCACGC TCGACGTCAC CGGACTGCCC AAGATACCCA TCAAGATCAG CGGCGCGCTG
GATTCGCCCA GCTACGGGGT GGACCCGGGC AAGATGCTGA TGAACACCCT TGAAGGCGCG
GGCGGCGTCA TCCAGGCCCC GGTGGAAAAG GGCGGCGAGG CGGTGAAGGG CATCGGCGGG
GCCATCAAGG GCCTGTTGCC GGGCCAGAAG CAATAG
|
|---|
| Protein sequence | MNRTLKLVAA AIGALVILAA AAIAIVVATI NPNDYKGRIA DAARSATGRE LVFDGDLSLS
FFPWLGVAFG PMHLGNPPDF PKAGAPSAAS GDDDIFLSIK GGGLRVAFMP LLSKRVEVAE
LMLDGLYLNL VRAADGRTNW DFAKPGQTPA ATAAPAPQST QSAQPAQPSA SGGAPLAVAV
DTLSVKGASL SFRDLGTGQQ FRARDLNVNV NGLAPGGDPA DIRLAVAMSG QKPDIDADLS
LAARVQSDLD GSVLRIDGLT VTLTPKGGVV PAGIGKVELA GDLTVHTVPQ RVDIARLSLS
TPTLKVGANG TAALGAQSFE GLVTLTGSPR KAMEALGTPM RTADPKVLDA LDLKLDVQAA
PAKMDVRSIT GKLDDTAIQG KASAVPGAVQ VIRAELALDA IDVDRYLPPE GDKGKATEKG
AAPTTDKGGK DGKAAPQDGT AEAKKSLRTI DADVTFKAGR LVASKVPMTN VLVHLVADKG
LVRINPLQLN LGGGSMNGDI TADTRAEATK SRIVTTVKGV EVGELQQAAL GKRHLSARTD
VKTDLTATGD DWNAAKHTLA GTASLAMTQG TIHGFQIIPE GIKGAESKRA GASGQKFDSL
TASVRADKGV VSNKDLKFVS PGIGATGAGT ADLGRNVVDY AATLDVTGLP KIPIKISGAL
DSPSYGVDPG KMLMNTLEGA GGVIQAPVEK GGEAVKGIGG AIKGLLPGQK Q
|
|---|
| |