Gene DvMF_2858 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvMF_2858 
Symbol 
ID7174799 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris str. 'Miyazaki F' 
KingdomBacteria 
Replicon accessionNC_011769 
Strand
Start bp3609961 
End bp3610698 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content70% 
IMG OID643541390 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_002437263 
Protein GI218887942 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones89 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAACGA CAGCCAGAAA CGCCATCGTC ACCGGCGGGT CGCGCGGCAT AGGCCGGGCC 
ATCGCGCTGC GGCTGGCGCA GGACGGATTC TGCGTGGTGG TCAACTACGC CAGCAACGCC
CCCGCCGCCC TCGAGGTGGT GGACGCCATC GCCAGGACGG GCGGGCAGGC CGTGGCCGTG
CCCGCCGACG TGGGCGAAAC GGGCGACGTG GAGGGCCTGT TCGCCGCCGC GCACGATGCC
TTCGGTCAGG TGGGCGTGGT GGTGAACAGC GCGGGCATCA TGCCCATGCT GCCCATTGCC
GGGGGCGACA CCGCCGCCTT CGAAAAGGTG CTGCGCACCA ATCTGACCGG CACCTTCAAC
GTGCTGTCCC GGGCGGCCAA CGCGCTGACG GCGGGCGGGC GCATCATCGC CCTGTCCACC
AGCGTCATCG CCAAGCCCTT TCCCGGCTAC GGACCGTACA TCGCCAGCAA GGCGGGGGTG
GAAGGACTGG TGCGGGTGCT GGCCAACGAA CTGCGGGGGC GGTCCATCAC CGTCAATGCC
GTGGCGCCCG GCCCGGTGGC CACGGACCTG TTCCTGAACG GCAAGACCGA AGAGCAGATC
GCCGCCATCG GCAAGCTGGC CCCGCTGGAG CGGCTGGGCA CGCCGGAAGA GATCGCCGGC
GTGGTGTCCT TTCTGGTCGG GCCGGAAGGC GGCTGGATCA ACGCCCAGGT GGTGCGGGTG
AACGGCGGCT TCGCCTGA
 
Protein sequence
METTARNAIV TGGSRGIGRA IALRLAQDGF CVVVNYASNA PAALEVVDAI ARTGGQAVAV 
PADVGETGDV EGLFAAAHDA FGQVGVVVNS AGIMPMLPIA GGDTAAFEKV LRTNLTGTFN
VLSRAANALT AGGRIIALST SVIAKPFPGY GPYIASKAGV EGLVRVLANE LRGRSITVNA
VAPGPVATDL FLNGKTEEQI AAIGKLAPLE RLGTPEEIAG VVSFLVGPEG GWINAQVVRV
NGGFA