Gene DvMF_2839 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvMF_2839 
Symbol 
ID7174780 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris str. 'Miyazaki F' 
KingdomBacteria 
Replicon accessionNC_011769 
Strand+ 
Start bp3586620 
End bp3587675 
Gene Length1056 bp 
Protein Length351 aa 
Translation table11 
GC content70% 
IMG OID643541372 
ProducttRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 
Protein accessionYP_002437245 
Protein GI218887924 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0482] Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain 
TIGRFAM ID[TIGR00420] tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones93 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGATCG CCGTCGCACT CAGCGGAGGC ACCGACAGCC TGTTCGCGCT CCTGCTTCTG 
CTGGAGCAGG GGCAGGACGT GTTCGGCCTG CATGCGCGTT TTCTGCCCCC GCGTGCCGAC 
CAGCCTTCGG GCAACCCGGA CCCGGCCGAG GCCATCGGCG CCATGTGTGC CCGGCTTGGC 
GTGGACTTTC ATGCCGTGGA CCTGGCCGAT GCCTTCGAAG AGGCGGTGGT GGCCCCGTTC 
ATCGAGGAAT ACGTGGTGGG GCGCACGCCC AACCCCTGTG CCCGGTGCAA CGCCACCATG 
AAGTTCGGCC TGCTGCTGGA CGCCGCGCGC GCCCTTGGCG CGGCGCGCCT GGCCACGGGC 
CATTACGTGC GCCAGCTGCG CCACCCGCAA TGGGGCATGA CCCTGCAACG GGGGGCGGAC 
CCGGCCAAGG ACCAGAGCTA CTTCCTGTCG CTGGTGGATC GCGCCCGGCT GGAACAGGCC 
GTGTTTCCGC TGGGCAACTG GCGCAAGGAG CAGGTGAAGG CCGAACTGGT GAAGCGGAAC 
ATCGTGCCGC CGCTGCCGTC GGAGAGCCAG GAAATCTGCT TCGTGCCCGG TGACGACTAC 
CGCGCCTTCC TGCGCGACCG GCAGGTACGC CTGCCCGGGC CCGGCCCCAT AGTGACCATG 
CGCGGTCGCA AGATCGGCAG CCACAAGGGT TTGTGGCAGT ACACCGAGGG CCAGCGGCGC 
GGCCTGGGCA TCGCGTGGGA AGAGCCGCTG TACGTGGTGT CCAAGGACAT GGAGAACAAC 
GTGCTGCTGG TGGGCGGGCG CGAGCATCTG GCCGCGCGCG GCTGCCTGAC CGAGGACGTG 
AATCTGCTGG TGGACCCCGC CGACTGGCCC GCCGAGATCA GCGTGCGCAC CCGTTACCGC 
CAGGCCCCCC AGCCCGCGCG GGTGACCGTG GGCGATACCG GCATGGCCGT GCGCTTTCGC 
GAGCCGCAAA CCCCGCCCGC ACGGGGGCAG GTGGCGGCGG TGTACGATGC CGAAGGGCAC 
GTGCTGGCGG GGGGCGTCAT CCTGGGGCCT GTGTAG
 
Protein sequence
MKIAVALSGG TDSLFALLLL LEQGQDVFGL HARFLPPRAD QPSGNPDPAE AIGAMCARLG 
VDFHAVDLAD AFEEAVVAPF IEEYVVGRTP NPCARCNATM KFGLLLDAAR ALGAARLATG 
HYVRQLRHPQ WGMTLQRGAD PAKDQSYFLS LVDRARLEQA VFPLGNWRKE QVKAELVKRN 
IVPPLPSESQ EICFVPGDDY RAFLRDRQVR LPGPGPIVTM RGRKIGSHKG LWQYTEGQRR 
GLGIAWEEPL YVVSKDMENN VLLVGGREHL AARGCLTEDV NLLVDPADWP AEISVRTRYR 
QAPQPARVTV GDTGMAVRFR EPQTPPARGQ VAAVYDAEGH VLAGGVILGP V