| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_2838 |
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| Symbol | gatA |
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| ID | 7174779 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011769 |
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| Strand | + |
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| Start bp | 3585069 |
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| End bp | 3586574 |
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| Gene Length | 1506 bp |
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| Protein Length | 501 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 643541371 |
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| Product | aspartyl/glutamyl-tRNA amidotransferase subunit A |
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| Protein accession | YP_002437244 |
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| Protein GI | 218887923 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases |
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| TIGRFAM ID | [TIGR00132] glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, A subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 94 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGATA CGTCCACCGC AATCGTTTCC CTGTCGCTGG CAGAAGTGCG CGACCGGCTG
GCCCGGCGCG AACTGACGGC GGAGCAGGTC ACCGCCGCGT GCCTAGACCG CATCACGGCC
ACCGAGCCCG CCATTGCCGC GCTGCTCGTC ACCAGAGGCG AGGGAGCCCT GGCCGAAGCC
CGCGCGCTGG ACGCCGCCGG GCCGGACCCG GCAAAGCCCC TGTGGGGCGT GCCGCTGACG
GTCAAGGACG CCCTGACCAC GGCGGGCACC CGCACCACCT GCGGCTCGCG CATCCTGGGC
GACTTCACCC CGCACTACGA CGCCTTTGCC GTGGGCAAGT TGCGTGAGGC CGGTGCGGTG
ATCCTGGGCA AGACCAACAT GGACGAATTC GCCATGGGGT CGTCCACCGA AAATTCCGCC
TTCGGCCCCA CCCGCAACCC GTGGAACGTG GCGCGCGTGC CGGGCGGTTC CAGCGGCGGT
TCCGCCGCCA GCGTCGCCGC CGGGCAGTGC TTCGGGTCTC TCGGGACGGA CACCGGCGGC
TCCATCCGCC AGCCCGCATC CCTGTGCGGG TGCGTGGGCC TGAAGCCCAC CTACGGGCGC
GTGTCGCGCT TCGGGCTGGT GGCCTACGGC TCGTCGCTGG ACCAGATCGG TCCGCTGACC
CGCACCGTGG AGGACGCGGC CCTGCTGCTG TCGGTCATCG CCGGGCACGA CCCGCGCGAC
GCCACCAGCG CCACCCTGCC CGTGGACGAC TACATGGGCG CGCTGGCCTC CCGCAAGGAT
CTGTCCGGGG TGCGCATCGG CGTGCCGCGC GAATTCCGGG GCGAGGGCAT CGACCCCGAG
GTGTCCGCCG CCTGCGAGGC GGCGCTGGAT ACGGCCAGGG GCCTCGGCGC CACCATCGTG
GACGTGGAAC TGCCGCACAC CCCCTACAGC ATCGCGGCGT ACTACATCAT CGCCCCGGCA
GAGGCCAGTT CCAACCTGGC CCGCTTCGAC GGGGTGCGTT ATGGCCGCCG GGCGGAAAGC
CCGCGCGACC TGGCCGACCT GTACGTGCGC TCGCGCGCGG AAGGATTTGG CGACGAGGTG
CAGCGGCGCA TCATGCTGGG CACCTACGTG CTGTCGTCCG GCTACTACGA CGCCTACTAC
CGCAAGGCCG CACAGGTGCG CCGCCTGATC CGCGAGGACT ACGAGAAGGC CCTTTCCCGG
TGCGACGTGC TGTGCGGCCC GGCATCGCCG GTGACGGCGT GGGGCCTTGG CGAACTGACC
AGCGACCCGC TGAAGATGTA CATGATGGAC GTGTTCACCC TGTCGCTGAA CCTGGCGGGC
CTGCCGGGCC TGTGCATTCC CGTGGGCATG GGTAGCCGTT CCGGCATGCC CGTGGGCTTG
CAGATGCTGG GCCGGGCCTT TGGCGAGGGC GACCTGCTGG CGGCGGCCAA CGTGCTGTCC
GGCGCGCTGG GCGTGCCGGG GGTGGCACCC GCCATTTCAG CCGCCGCAGC CGGGGCCGGC
GCGTAA
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| Protein sequence | MSDTSTAIVS LSLAEVRDRL ARRELTAEQV TAACLDRITA TEPAIAALLV TRGEGALAEA
RALDAAGPDP AKPLWGVPLT VKDALTTAGT RTTCGSRILG DFTPHYDAFA VGKLREAGAV
ILGKTNMDEF AMGSSTENSA FGPTRNPWNV ARVPGGSSGG SAASVAAGQC FGSLGTDTGG
SIRQPASLCG CVGLKPTYGR VSRFGLVAYG SSLDQIGPLT RTVEDAALLL SVIAGHDPRD
ATSATLPVDD YMGALASRKD LSGVRIGVPR EFRGEGIDPE VSAACEAALD TARGLGATIV
DVELPHTPYS IAAYYIIAPA EASSNLARFD GVRYGRRAES PRDLADLYVR SRAEGFGDEV
QRRIMLGTYV LSSGYYDAYY RKAAQVRRLI REDYEKALSR CDVLCGPASP VTAWGLGELT
SDPLKMYMMD VFTLSLNLAG LPGLCIPVGM GSRSGMPVGL QMLGRAFGEG DLLAAANVLS
GALGVPGVAP AISAAAAGAG A
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