| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_2778 |
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| Symbol | |
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| ID | 7174717 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011769 |
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| Strand | + |
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| Start bp | 3512891 |
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| End bp | 3515362 |
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| Gene Length | 2472 bp |
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| Protein Length | 823 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 643541310 |
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| Product | PAS/PAC sensor signal transduction histidine kinase |
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| Protein accession | YP_002437184 |
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| Protein GI | 218887863 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 76 |
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| Fosmid unclonability p-value | 0.960526 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCAAGC GCGCTGTTTC CCGTACCGGC ACGGCTCCCG GCACCGGGGG AGCGCCCCTG
GAATCGCCCG GAGCGGGGGA ATCGCCTGCG TCCGCCGGTT TCGCCCCCAC ATCGTGTCCC
GCCGGTTCTG GCCAGGCCTG TCAGCGGGCA GATGGCGGCA TGCCTGCGCG GCAGAACGAC
CCCCGACCGG AACCGTTCTC CAAGCCCGCC GCGCACAGAT CCGTCCAGAC CCCCGAAGAG
GAACTGCAAC GCCTGCGCGC CGAGCTGGCC GTGCTGCGCC ACCGGTTGCG CAAGGCCGAG
GCGCGCCTGC TGCCCCTGGA TGCCGACCCG GAAACCCCGG ACATGCTGCT GGACGCGGTG
CCCGTGCTGG CGTTGTGCAT CGACGCGGAC GGGCGGGTGC GCATGGTCAA CCGGGGGTTC
GAATCGTTGT TCGGCATCTG GCGCATGGAG GCGCGCGGCC ACCGGCTGGA GGGGCTGGTG
CCCCCGGAAG TGTCCGCGCA GTTGTCCCCC CTGCTGGCCC GGGCCTTTGC CGGTGAACAG
CGCGTGACCG GCGAACTGGC CGTCAGCGGG CACGCGGGCG AACGCTGGTT CAACATTACC
CTGGCCGGGC GCGGACTGCC GGGCAGTGGC ATCATGTGCC GGGTGCTGCT GGTGGGGGTG
GAAATCACCG AGGCCGTCAC CGCCCGCCGT GCCCTGCGCG AGGTAGGCGA AACCCGCCGC
GCCCTGCTGG ACGCCGCGCC GGGGGCGGCC TTTCTGATGG AGCCGGACGG CACCATCGTG
GCCCACAACA GTGCCGCCGC GCGCCACGCC TGGCGCGACG GACAGGACAT GGTGGGCGAG
AGCGTGTTTG CCCTCATGCC CCCGGGCATG GCCGCCAGAC GCCGCGAGGA GCTTGCGCGC
TGCGTGGCCA CCGGGCGTGG CGGCTACTTC GAGGAACACG ACGGCGGCCG CGTGCTGCGT
CACAACCTGG CGCCCGTGTT CGACGTGCAA GGCCGGGTGG CCCAGATTGC CGTGTACCTG
CACGACGTGA CCTCCCAGCG CCGGGCCGAA GAGGAACTGC AAGCCACCCT GGAGCGCAAG
GACCGCATGG TTCACGCCCA CGAGGCGGCA TTGGGCCGGC ACGAGCGGCT GCTGCGGCGC
ATCTATGACG ACGTGCCCGT GGGGCTTCTG CACACCAGCG CGGCGGGCAA CGTCATCGAG
GCCAACCGGG CGTTGTGCGC CATCACCGGA CTGACCCTGA GCGAAATGCG AGGCATGCAT
GTGCTCGACC TGGTGCTGCC GGAATACCGC GAATCGCTGG CCTACGAGAT GCGGCGCAAC
CGGGCGGAGC GCGACAGGGT GGCCCGGTTC GAGGTGCGGG TGCGCAGGCC CGACGGCGAG
ATACGCCTGT GCCGCGTCAC CTCCACGGTG ATCTGGGGCA CCGACGACCT GCCCCTGTTC
GGGCTGGGCG TTGTGGAAGA CCAGACCGAA CTGCACCGCC TGCGGGCCGA GGCCGTGCGG
GCCGGGCAAC TGGCCGCCCT GGGCGAACTG GCCGCCGGGG TGGCGCACGA GATCAACAAT
CCCATCACCG GCATCATCAA CTGCGCCCAG CTGCTGCTGG ACGATGCCGA CGTGTCGGCA
CAGGGCGGCA TGCGCCACGA ACCGCAACCG GAACTGGCCG GACGCATCCT GCGCGAGGGG
CAGCGCATCG CGGGCATCGT GCGCAACCTG TTGTTCTTCG GGCGCGACAG GCGCGACACC
GACGTGCGGG TGGATCTGCG CGAGGTGCTG CACGACACCC TGGCCCTGAC CCGCACCCTC
ATGGAGGGCG ATGGGGTGGA CATCCAACTG AATCTGCCCG ACCTGCCGCT GATGGTTGTG
GGCCGCCCCG GCGAATTGCA GCAGGTGTTC ATGAATCTTC TGGCCAATGC CCACCATGCC
CTGAACGCGG CGGCGACCGG CGGGCAGGGC GAGCCCGGTG CCGTCCCGCG TCCCAGGCGC
CTGACCCTGA CGGCGGCGCG GTCCTCGCTG GGGCCGCAGC GCGAGGCCGC CCGCAAGGGT
GTGTCCCTGG ACGGCGGGGG CGATGGCTGC CGGGGCATAT GCATTCCCGA ACGCCGCGCC
ACGCGGCGCA GGGGCGGGCG GCTGACGGTG AGCGGTCCGT GCGTGTGCGT CACGGTGGCC
GATACGGGCA CGGGCATTGC CCCGGCGGTG CTGGACCGGG TGTTCGAGCC GTTCTTTACC
ACCAAGCCGG AGGGCAAGGG CACCGGACTC GGCCTGTCCA TCAGCTACGG CATCGTCAAG
AGCCACGGCG GCACGCTGGT GCTGGACAGT GACGGCGTTT CCGGCAGCCG CGCGGTGGTG
GTGCTGCCCG AGGCGCCGCC CGAGTCCCTC CTTGAAGCCG ACGCGGGGGC GCCAACTGCG
CCAGACACGC CAGACACGCA TGCTTCGGGC AGGCAAGGGG AGGTCGCCCA TGGCGAAGAT
ATTGCTCGTT GA
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| Protein sequence | MPKRAVSRTG TAPGTGGAPL ESPGAGESPA SAGFAPTSCP AGSGQACQRA DGGMPARQND
PRPEPFSKPA AHRSVQTPEE ELQRLRAELA VLRHRLRKAE ARLLPLDADP ETPDMLLDAV
PVLALCIDAD GRVRMVNRGF ESLFGIWRME ARGHRLEGLV PPEVSAQLSP LLARAFAGEQ
RVTGELAVSG HAGERWFNIT LAGRGLPGSG IMCRVLLVGV EITEAVTARR ALREVGETRR
ALLDAAPGAA FLMEPDGTIV AHNSAAARHA WRDGQDMVGE SVFALMPPGM AARRREELAR
CVATGRGGYF EEHDGGRVLR HNLAPVFDVQ GRVAQIAVYL HDVTSQRRAE EELQATLERK
DRMVHAHEAA LGRHERLLRR IYDDVPVGLL HTSAAGNVIE ANRALCAITG LTLSEMRGMH
VLDLVLPEYR ESLAYEMRRN RAERDRVARF EVRVRRPDGE IRLCRVTSTV IWGTDDLPLF
GLGVVEDQTE LHRLRAEAVR AGQLAALGEL AAGVAHEINN PITGIINCAQ LLLDDADVSA
QGGMRHEPQP ELAGRILREG QRIAGIVRNL LFFGRDRRDT DVRVDLREVL HDTLALTRTL
MEGDGVDIQL NLPDLPLMVV GRPGELQQVF MNLLANAHHA LNAAATGGQG EPGAVPRPRR
LTLTAARSSL GPQREAARKG VSLDGGGDGC RGICIPERRA TRRRGGRLTV SGPCVCVTVA
DTGTGIAPAV LDRVFEPFFT TKPEGKGTGL GLSISYGIVK SHGGTLVLDS DGVSGSRAVV
VLPEAPPESL LEADAGAPTA PDTPDTHASG RQGEVAHGED IAR
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