| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_2758 |
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| Symbol | |
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| ID | 7174697 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011769 |
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| Strand | - |
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| Start bp | 3484444 |
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| End bp | 3486540 |
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| Gene Length | 2097 bp |
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| Protein Length | 698 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 643541291 |
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| Product | diguanylate cyclase with PAS/PAC sensor |
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| Protein accession | YP_002437165 |
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| Protein GI | 218887844 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 80 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGGGTCA TCCCCCTACG GCAACGCCTG TTGCTGCTTC TTGCCATCCT TTCGTCCCTG
GCGCTGGTCG CGCTCGGGAC GTTCTCCTAC GTACGCGCAA AAAACGTCAT GCTGCACGGG
GCAGAATCGG CCATGGCCCT TCAGGCGGAC ACCCTGGCCA ACGCCATCGT CAGCCAGTAC
GCCGGTGAAT ACGCCCGCGC CGTGGCCAGT CTGCGCCAGG ACCCGCGCGT GGTGGCCTGC
CTTTCCGGGC GGTCCTACGA CCATCAGGGG CTGATGGCCA GTTGGGCCAG CTTCATGCAG
CAACGGCCCG AAGCCTACTT CACCTACTTC GCGGACATGT CCGGGCGGGT CCACGCCCTC
CAGCCCCCGC ACGAACTGTC CCCCGACTTC GACGCCAGGA CGCGCCCGTG GTTCCGCAGG
GCCATGGAGC ACCCCGGCGT GGTGGGCTGG TCCGACCCGT ACACCGAATT CATCACCGGC
AAGACCGTGG TCAGCACCGT GGCCACGGTG GACGATCCGG CGGACGGCAA GCCGCTGGGG
GTGCTTGGCC TGGACATCAC CACCGACGGA CTGCGGAACA TCCTTTCCGG CGTGGCCCTG
CCCTCGGGCA GCGGGCTGCT GGTGCTGACC GCCAATGGGC ACCCCGTCAC CGCCACCGGG
CTTGGGGCCG CGCTGGCCGA CCGCACGGAC ACCACCCCCC TGCGCAACCT AGCGCGCGGC
ACCCATGCGG CCCACGGGGC GGACAGGATC ATCAACGGCA CCATAGACGA CAGTGCGGGC
AACGGCGCCA CCTACCTGCA CGTGGACGGC GAACGGGTGC TGACCGCCGT GCGCGCGGTG
CCCGGCCCCG GCTGGCGGCT GGTGCTGCTG GTGCCGCAGG AAGAACTGCT GCGCGCCGTG
GCCCCCATCC GCTACGGCAC CTTGCTCGCC ATCGGCGGCA TGCTCTTTCT GTTTGCCGTG
CTGTTCGCGG TGGCAGCGGC GGGGGCGACC GGTCGGGTGG GCCAACTTGC CGAATACATG
CGCAGCATTG CACGCGGCGA CTTCACCGTG CGCAACCTGT TCACCGGGCG TGACGAATAC
GGTGCGTTGA ACCGCCACCT GAACGAACTG GTCACGGCCC GCCGCGACGC GGAAGCCGCC
CTGCGCGATG CCGAACGCCA GCACCGCGAA CTGGTGGAAA ACGCGCCCAT CGGCATCTTT
CGTACCGCCT GGGACGGCAC CATCAACGTG CTGAACCAGC ACGGCGCGGC CCTGCTGGGC
TTTCGCGACG TGGCCCACGC CCGCGCAGTG CTGGATGATT CCGTCATCCC CCTGTACGCC
GAACCCATGG ACCGCCAGGC CATGCTGGAC GACCTGACCG CCGGAGAGGT GGTGACCGGG
CTGCGGCTGC GCTGGTACCG GCGCGGCGGC GAGGCCATCT GGGTATCGCT GTACGCCCGG
CGCACCGGCA CGCCGGAAGC GCCGGAAGTG GAAAGCTTTT TCCTGGACGT GACCGACCAG
GTGGAAGACA CCCTGCGCCT GGAACAATTG GCCACCACCG ACGAACTGAC CGGCGTGGCA
AACCGCCGCC ACTTCATGGC CCGGCTGGAG GACGAGGCGG CGCGCGCCCA ACGCTATGGC
CGCCCGCTTT CCGTACTGCT GCTGGATGCC GACCACTTCA AGTCCATCAA CGACACCTGG
GGACACGAGG CGGGCGACAT GGTGCTGCGC CACATCACCG ACGTGATGGG CCTGTCCCTG
CGCGAAAACG ACCTTATCGG GCGTCTGGGG GGCGAGGAAT TCGGCGTGCT GCTGCCGGAA
ACGGCGCAGG AACGCGCCCT GCGCACGGCG GAGCGCATCC GCGCCGCCGT GGAGGACGCC
CCGGTGGCCG TGCGCGACGT GTGGGTGGGC TGCACCGTCA GCGTGGGCGC GGCGGAATAC
CGGGGGGCCA ACGATTCGCT GGACGACCTG ATCCGCCGTG CCGACCACAT GCTGATGCGC
GCCAAGGAAG AGGGGCGCAA CCGGGTATGC GCCCAGCAGG CCAGGCCCGC CTGCGCGGAA
TCCCCTGACG GCACGGGCGG GAATGGCCCT GCCGGAAGCG GGCAGGACGC GGCCTGA
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| Protein sequence | MRVIPLRQRL LLLLAILSSL ALVALGTFSY VRAKNVMLHG AESAMALQAD TLANAIVSQY
AGEYARAVAS LRQDPRVVAC LSGRSYDHQG LMASWASFMQ QRPEAYFTYF ADMSGRVHAL
QPPHELSPDF DARTRPWFRR AMEHPGVVGW SDPYTEFITG KTVVSTVATV DDPADGKPLG
VLGLDITTDG LRNILSGVAL PSGSGLLVLT ANGHPVTATG LGAALADRTD TTPLRNLARG
THAAHGADRI INGTIDDSAG NGATYLHVDG ERVLTAVRAV PGPGWRLVLL VPQEELLRAV
APIRYGTLLA IGGMLFLFAV LFAVAAAGAT GRVGQLAEYM RSIARGDFTV RNLFTGRDEY
GALNRHLNEL VTARRDAEAA LRDAERQHRE LVENAPIGIF RTAWDGTINV LNQHGAALLG
FRDVAHARAV LDDSVIPLYA EPMDRQAMLD DLTAGEVVTG LRLRWYRRGG EAIWVSLYAR
RTGTPEAPEV ESFFLDVTDQ VEDTLRLEQL ATTDELTGVA NRRHFMARLE DEAARAQRYG
RPLSVLLLDA DHFKSINDTW GHEAGDMVLR HITDVMGLSL RENDLIGRLG GEEFGVLLPE
TAQERALRTA ERIRAAVEDA PVAVRDVWVG CTVSVGAAEY RGANDSLDDL IRRADHMLMR
AKEEGRNRVC AQQARPACAE SPDGTGGNGP AGSGQDAA
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