| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_2731 |
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| Symbol | |
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| ID | 7174670 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011769 |
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| Strand | - |
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| Start bp | 3455132 |
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| End bp | 3458155 |
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| Gene Length | 3024 bp |
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| Protein Length | 1007 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 643541264 |
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| Product | PAS/PAC sensor hybrid histidine kinase |
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| Protein accession | YP_002437138 |
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| Protein GI | 218887817 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase
[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 77 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCGTC ACCTGGGGCT TGCGCTGCAC TGCGTGCCCG AGGCGCACGA CGTCGTCGCC
GGTTCCTGCT GGCCGGGAGA GTCCGCATCC GGGCTTTCCG GCCAGCTGGA ACCGGGGGCG
CGGGGGGCAC GGCACGCCGG GCCTTCCGGG ACGCAAACGA CCGGGCCGCA AACGTCCGGG
GCACAAACCC CAGGGGCGAA ATCGCCCGCA CACAAACCTG GCTCACCGCA ACCGGATGGC
CCGGTGCCCA TGCCCACGCA CGGCGGGCCA CCCCGCTTTG CGGGCGTGGC CCGTTCTGCT
ATCATGCGGG ACACGGCGGT CACCATCTGC CTCTCCGCCA GTCCGGCGGA CACGCTGGCG
GCCAGCCCCA TGCCCGGCCC GGTGCCCGGC CAGCCGGACA TGTCGGCGGA CATGCCCGAC
ATCCTGATGC CGGAATGGCC CGCGTCCGCG CGTGTTCCGG CACGACGGGC AGCCGCCCTT
GCCCTGCTTG CGGAAACCGC ACTCGGCGTC CACCCGGTTG CCCACCCGGC CACTACCCAC
GGCCCCACCA CCCGCTGTCC AGCTACCCAC AGGGAAGCCA TGTCCGCACC ACCGCCGCCC
CCATCCATCG GCACGTCCGG CCACACGTCC GGACAGGACG CCACGGCATC GCGCGCGGCG
CGGCTCAGCC TGCTCATCGT CTCCGAGTTC GAGGAATTCG CGCGCGGGCT GGTGACGCGG
CTTGCGGCCT GCGGGCTTGA GCCTTCGTAC ATGCTGGCCG AAACGCCGTT CGAGCTTTCG
CGCCTGATCA CCGAAGAACC GTGGGACATG GTGGTGGCCG AATCCGAAGC CCCCGGCATG
ACCTGGCAGG AAGTGCTGAT GCTGGTGCGC GGGGTGCGCG AGGACGTGCC CTTCGTGCTG
GTGGCCCCCG CCGCCGACGA AGGGCTGGCC CTGGAGGCCG TGCGCGAAGG AGCGGACGAG
GTGCTCTGCG CCGACGACTG GCACCTTGGC CCGGCCTTCA TGCGCCTGGT GCGCGAGGCG
GAGCGACGGC GCACCCTTTC CGTGCACTGG CGCGAGATAA ACCGCGATGC CCGGCAGTGG
CGCGGCATGG TGGAAGGCAC CGTGCTCGGC ATCTTCCGCT GCCGCCCCTG GGGCGAACTG
TTCAGCGCCA ACCCCGCCTT TGCCGACATG TTCGGCTATC CCTCGCCCGA TGCACTGTTC
GAGGCCATCC GGTCCGGCGG CGCAGCCGGT GTCGCTCCCG GCGCCACCAT GCCGGAGGGC
TGGCTGCCCG GCGGCTTTCT GGACCGCGCC ACACTGGACC GCATGCTGAA CACCCTGCGC
GACGAAGGCG AGGTGCGCGA CTTCGAAACC ACGGCCCGCC GGGCCGACGG CTCCACCTTC
TGGATTTCGG TGAACGCCCG CGTGCAGCGC GGCTCCACCG GCGAAATTTC CGGCATCGAA
GGCACGGTGG AAGATATCGA CCGTCGCAAG GCCGTGGAAA ACATGATCAT CCGCGCCAAG
CAGGAATGGG AGAAAACCTT CGACAGCGTG CCCGACATCA TCATGATCAT GGACGCAGGC
CAGCGGGTGC GGCGCAGCAA CATGGCCCTG GGCAGGCTGC TGGGCCTGCA CCCCAAGGAT
CTGGTGGGAC GCCACTGCAA CGACGTGCTG GGGGCGTCCG TCATGGCCGA CGACGTGTGC
GCGGCCATCC GGGCCATGCC CTGGGGCGAA AGCCGCACGG AGGAACTGTA CCTGCCCAGC
CTTGGCGGGC ACTTTCTGGT CACCCTGTCG CCCTTCCTTG CCGACAGCCA GTACGACGGC
GAACCGGTCC GCGAAGGGGA CGCGCCCGGC ACGGTGCTGG TGGCGCACGA CATCAGCAGC
CGCAAGCAGC TGGAAGCCCG GCTGCGCCAG GCCCAGAAGA TGGAGGCCAT CGGCACGCTG
GCCGGGGGCA TCGCCCACGA TTTCAACAAC ATCCTGGGCG TGATGATGGG CTACACGGAA
ATGAGCCTGG ACCAGACCGA AGAAGGCGAT GCCCAGCACC GCCGCCTGAC CGAGGTGCTG
GCCGCCGGAC GCCGCGCGCG CGACCTGATC CGCCAGATAC TCACCTTCAG CCGGCAGGAG
GAGCCATCCC GCCTGCCACT GCCGCCGCTG GCGCCCATCA AGGAAACGGT GCGCCTGCTG
CGCGCCACCC TGCCCGCCAA CGTGGACATC CGCCTGGACC TGGCCGAGAC CGGCCCGCTG
CTGGCCAACC TGAGCCAGTT GCAGCAGGTG ATCATGAACC TGTGCGCCAA CGCGGCCCAC
GCCATGAAGG AACACGGCGG CGTGCTGCAT CTGGCGCTGG ACGCGGTGGA ACTGGACGAG
GACGAGGCCG CCGCCCGTTC GCTGCCCGCC CCCGGCGGCT ACGCCCGGCT GCGCGTGCGC
GACACGGGCC ATGGCATCCC GGCGGACATC ATGGAGAACA TCTTCGACCC GTTCTTCACC
ACCAAGAAGC CGGACGAGGG CACGGGCATG GGCCTTGCGC TGGTGCACGG CATCGTCACC
GCCCACGGCG GGGCCGTTGC GGTGCAGTCC ACCGTGGGGG TGGGCACGGA GTTCGAGGTA
CTGCTGCCCC TTGCCCCGCA GGCGGGGGAA GAGGCCGCCA TGCGGGCGGA TTCGGCCCAC
AGCGGCAGCG GCCTTGCGCT GGTGGTGGAC GACGAGGCCC CGCTGGCCGC CATCATGGGG
GCCATGCTGG AAAAGCTGGG CTACCGGGCG GTGGTGACTG CAAATCCGCT GGACGCGCTG
GAACGCTTCC GGGCGGACCC GGCAAGCTGG CGGCTGGTGG TCACCGACCA GACCATGCCC
GGCATGACCG GCACCGAACT GACCCGCCAC ATGCGCGCCC TGCGCCCCGA CCTGCCGGTG
GTGCTGTGTT CCGGCTTCAG CGAGGGGCTG GGCCACGACG CGGCCATGGA GGCGGGCGTC
AGCATGATGC TGGCCAAGCC CCTGCTGCGC GCCGACCTTG CCGCCGCCCT GTCCGAACTG
GGGCTGGAGA GCGGGAAGGA GTAG
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| Protein sequence | MTRHLGLALH CVPEAHDVVA GSCWPGESAS GLSGQLEPGA RGARHAGPSG TQTTGPQTSG
AQTPGAKSPA HKPGSPQPDG PVPMPTHGGP PRFAGVARSA IMRDTAVTIC LSASPADTLA
ASPMPGPVPG QPDMSADMPD ILMPEWPASA RVPARRAAAL ALLAETALGV HPVAHPATTH
GPTTRCPATH REAMSAPPPP PSIGTSGHTS GQDATASRAA RLSLLIVSEF EEFARGLVTR
LAACGLEPSY MLAETPFELS RLITEEPWDM VVAESEAPGM TWQEVLMLVR GVREDVPFVL
VAPAADEGLA LEAVREGADE VLCADDWHLG PAFMRLVREA ERRRTLSVHW REINRDARQW
RGMVEGTVLG IFRCRPWGEL FSANPAFADM FGYPSPDALF EAIRSGGAAG VAPGATMPEG
WLPGGFLDRA TLDRMLNTLR DEGEVRDFET TARRADGSTF WISVNARVQR GSTGEISGIE
GTVEDIDRRK AVENMIIRAK QEWEKTFDSV PDIIMIMDAG QRVRRSNMAL GRLLGLHPKD
LVGRHCNDVL GASVMADDVC AAIRAMPWGE SRTEELYLPS LGGHFLVTLS PFLADSQYDG
EPVREGDAPG TVLVAHDISS RKQLEARLRQ AQKMEAIGTL AGGIAHDFNN ILGVMMGYTE
MSLDQTEEGD AQHRRLTEVL AAGRRARDLI RQILTFSRQE EPSRLPLPPL APIKETVRLL
RATLPANVDI RLDLAETGPL LANLSQLQQV IMNLCANAAH AMKEHGGVLH LALDAVELDE
DEAAARSLPA PGGYARLRVR DTGHGIPADI MENIFDPFFT TKKPDEGTGM GLALVHGIVT
AHGGAVAVQS TVGVGTEFEV LLPLAPQAGE EAAMRADSAH SGSGLALVVD DEAPLAAIMG
AMLEKLGYRA VVTANPLDAL ERFRADPASW RLVVTDQTMP GMTGTELTRH MRALRPDLPV
VLCSGFSEGL GHDAAMEAGV SMMLAKPLLR ADLAAALSEL GLESGKE
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