| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_2707 |
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| Symbol | |
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| ID | 7174646 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011769 |
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| Strand | - |
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| Start bp | 3425484 |
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| End bp | 3427406 |
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| Gene Length | 1923 bp |
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| Protein Length | 640 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 643541240 |
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| Product | putative PAS/PAC sensor protein |
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| Protein accession | YP_002437114 |
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| Protein GI | 218887793 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2202] FOG: PAS/PAC domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 66 |
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| Fosmid unclonability p-value | 0.109569 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCAGCA ATGAACACAT GACCAGCGCT GACCTTGTGG CCTTCTATGC TCCCCGGCTG
GATGCCATGG ACGCCCCCGC CCTGCTGCTG GATGACGATG GCGGCGTGCT GTACGCCAAC
AAGCCCGCCC GGCTGCTGCG CGGGGCGGGC GGTGATGCGG AGCACGCCAC GGAAACAAAG
GGGCCGCGCC CGAGATTGTC CGCGCCGGGC TGTCCGGCGC GCGCTCACGG CTGGCTGCAC
GACGAGGTGC CCCCCGTGCC CCAAGGCGGT ACGCCAGTGC GCGAAAGCCG CACCCGCATC
ACCCTGCCCG ACGGCGCTGG CATCCGGCAG ATAAGCTGGA CCTGCGTGGC CGTGCCCGTG
CCCGGCACAG GCGGGGGAAG TGGTACGGAT AAAGGGGAGA AAGCGTACCT GGACGGGGGG
AAGCGCGCGC ATAACGGCGA ATCTCCCCGA CAGGCCGGGA ACGGTGGCAC GCTCCGGCAT
GCGGGCATGC AGGAGATGCG CGGCCCGAAT GAAATGGACG AAGCGGACGA AACCGACGAA
ATGGATGGGG CGGACGGAGC GGATGACCGG AGCAGCGAAA ACGACACCGG CAGTGCAATC
TGCCCCCGCC ACCCGGCGCG CACCATCCAT CTGGCCTGGG GCCGCCTGCG CACCACCGAG
GGGGGGCAGG AAATGGGCTT CACCATTCTG CCCAACGGGG TCATCCAGGC GGTCAGCCCC
GCTTTGTGCG CCATCTGCGG CTACACACGG GACGAACTGG TGGGCCGGTC CGCGCGAGAG
TTCTACTTTA CCTCCACGGC GCGCAAGCGC ATCGTCAGTC AGCTCATCAA GCGGGCCGAG
GTGGAGAACG GCGAGGTGAC CCTGCGCCGC AAGGACGGAT CGCCCCTGGC CCTGTGGTAC
ACTGCCGAAT CCATCCGCGA TGCGGCGGGC CGCATGGTAG CCTACAGCGG CTACTTTCAG
GAGCGCCCGT TCGCCTTCTC GTCCAAGCTG GCCAGCGACT TTTCGCGCGT GGTGGATGCC
CTCCCGGGCC TGGCATGGGT ATGCGGGCGC GACCTGCGCA TCGTGGCCGT CAACGATGCG
TACCTTGCCG CTTATGGCCG CACGCGCGAC GAGGTGATGG GGCGCACCGA ATACGACTTC
CTGCCACCGG AACTGGCCCG CTACCCCGTG GAGGCGGCGC TGAAGGTGTT CGAGGAAAAG
CGGGAGCTGG AACACCCGGC TGTGCCGCAC CTGCTGGATC CGTCCGTATG GTACCGGGTG
ATCCGGCGGC CCATCTTCGA CGACAACCGG CAAGAGGTCA TCGGCCTGCT GGGCATTGCC
CAGGATATTT CCGCCAAGGT GGTGCAGGAA AACGCCTTCA TCGAGCAACT GCACACCCAC
CAGGGCGACG TGGTGGTGGT GACCGACGAC CAGGGGCGGA TATTGCGGCG GTCGCGCCAG
ACGCTGACCC CGGCCATATT CGGCCGGCAG GAGCCGTACG ACGCCTACAC CCTGGACATG
GGGCCGGTGC TGGACCTGCT GCACGAAAGC GACCTGCCCG CCGTGCGCCA GGCCCTGCTG
CGGGCCATGC GCGAACATCG CGAACAGCAC TTCGAATGCC GCATCCGCAA CCTGTCGGGC
AGCTATTCCA CCGTGCACGC CCGGCTGGTG TACAACGACA CCATCTACGG CGAGCCGCGC
GTGTACGTTG TGGCGCGCGA CGTTTCCGGC GAGATGGGAC TGCGCCAGGC ACCCATGGTG
CTGGAACGCC TGAAGGAGGC GGCGGGGGCA CGCACCGACC GCGAGTTGGC GAGCTTCCTG
AACGTGTCGG CGGCGTCCAT TTCCAACGCC CGCAAGAACG GGCGCATCCC GCCGGACTGG
CTCATCGATG CGGGGCTGAG GACGGGGAGG TCGATCGACT GGCTGGTGAG GGGCGTTGTG
TAA
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| Protein sequence | MTSNEHMTSA DLVAFYAPRL DAMDAPALLL DDDGGVLYAN KPARLLRGAG GDAEHATETK
GPRPRLSAPG CPARAHGWLH DEVPPVPQGG TPVRESRTRI TLPDGAGIRQ ISWTCVAVPV
PGTGGGSGTD KGEKAYLDGG KRAHNGESPR QAGNGGTLRH AGMQEMRGPN EMDEADETDE
MDGADGADDR SSENDTGSAI CPRHPARTIH LAWGRLRTTE GGQEMGFTIL PNGVIQAVSP
ALCAICGYTR DELVGRSARE FYFTSTARKR IVSQLIKRAE VENGEVTLRR KDGSPLALWY
TAESIRDAAG RMVAYSGYFQ ERPFAFSSKL ASDFSRVVDA LPGLAWVCGR DLRIVAVNDA
YLAAYGRTRD EVMGRTEYDF LPPELARYPV EAALKVFEEK RELEHPAVPH LLDPSVWYRV
IRRPIFDDNR QEVIGLLGIA QDISAKVVQE NAFIEQLHTH QGDVVVVTDD QGRILRRSRQ
TLTPAIFGRQ EPYDAYTLDM GPVLDLLHES DLPAVRQALL RAMREHREQH FECRIRNLSG
SYSTVHARLV YNDTIYGEPR VYVVARDVSG EMGLRQAPMV LERLKEAAGA RTDRELASFL
NVSAASISNA RKNGRIPPDW LIDAGLRTGR SIDWLVRGVV
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