Gene DvMF_2692 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvMF_2692 
Symbol 
ID7174630 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris str. 'Miyazaki F' 
KingdomBacteria 
Replicon accessionNC_011769 
Strand- 
Start bp3405744 
End bp3406334 
Gene Length591 bp 
Protein Length196 aa 
Translation table11 
GC content69% 
IMG OID643541224 
ProductdTDP-4-dehydrorhamnose 3,5-epimerase 
Protein accessionYP_002437099 
Protein GI218887778 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1898] dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes 
TIGRFAM ID[TIGR01221] dTDP-4-dehydrorhamnose 3,5-epimerase 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones64 
Fosmid unclonability p-value0.0340452 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCAGATCA TCGAAACCGG CATTCCCGGC CTGCTCCGGC TGGAGCCGCG CGTGTTCCGC 
GACGAACGCG GCTTCTTTCT CGAAACCTAC CGCCGCGACC TGTTTGCTGC ACTGGGCGTG 
CCCGCCGGGT TCGTGCAGGA CAACCACGCC CGGTCGGAAC AGCCCGGCGT ACTGCGCGGC 
CTGCACTTCC AGTTGCCCCC CGCCACCCAG GCCAAGCTGG TCTGGGTTAC CCGGGGCTCG 
GTCTTCGACG TGGCCGTGGA CCTGCGTGTC GGCTCGCCCG CCTATGGCAA ATGGTACGGC 
TGCGAGCTGA GCGAACGCAA CTTCGCGCGG CTGTTCGTGC CGCGCGGCTT CGCCCACGGG 
TACATGACCC TGGAGCCGGG CAGCGAGTTC CAGTACAAGG TCGACGCCTA CTATTCGCCG 
GAGCGGGACG CTGGCATCGC CTGGGACGAC CCGGACCTGG GCATCACCTG GCCGGACATC 
GCCCCCGCCC TGCCCATTCT GTCGGACAAG GACCGCCGCC TGCCCCGGCT GCGCGATCTT 
CAGTCGCCGT TCACCTTCGA ACCCGCCCCC CCGGCAAAGG CCGACGCATG A
 
Protein sequence
MQIIETGIPG LLRLEPRVFR DERGFFLETY RRDLFAALGV PAGFVQDNHA RSEQPGVLRG 
LHFQLPPATQ AKLVWVTRGS VFDVAVDLRV GSPAYGKWYG CELSERNFAR LFVPRGFAHG 
YMTLEPGSEF QYKVDAYYSP ERDAGIAWDD PDLGITWPDI APALPILSDK DRRLPRLRDL 
QSPFTFEPAP PAKADA