Gene DvMF_2686 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvMF_2686 
Symbol 
ID7174624 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris str. 'Miyazaki F' 
KingdomBacteria 
Replicon accessionNC_011769 
Strand- 
Start bp3398121 
End bp3399071 
Gene Length951 bp 
Protein Length316 aa 
Translation table11 
GC content69% 
IMG OID643541218 
Productpolar amino acid ABC transporter, inner membrane subunit 
Protein accessionYP_002437093 
Protein GI218887772 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0765] ABC-type amino acid transport system, permease component 
TIGRFAM ID[TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones64 
Fosmid unclonability p-value0.0551964 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGCGCC ACAGAATGGA AAATTCCCGA CACAGCCGGG ACAGCTCGGC CCCAGGACAC 
CCAACGGCGC ACGGCACCGG CACCGATGCG CCCGGTGACT CGTCGCGTCC CAATCCGGCC 
CCGCCTGCCC GGCAGGCCCC GGAGGTTCCG GCCCCACCAC CCGCACGCCG CGCCCTGCTG 
GCCGTGCTCG GCGACGTGAC CCGGTACTGC TGCCTGCTGG GTGCGCTGAC GTGGATCACC 
CTGCGCGGCA CGGCGGCTTC GGGCTACGAC TGGCAATGGC ACCGGCTGTG GCGGCACCTG 
TTCACCACGG CGGGGGATGG CGGGTTACGC GCCGGTCCGC TGCTGGACGG CCTTGGCGTG 
ACGGTGCAGG TGGTGGCGGC CAGCCTTGGG CTGGCGCTGC TGGCCGGGCT GCTGGCCGCA 
CTGCTGCGCC AATCCGGCTC GCGCGTGGGG CGCGCCCTGG CCGTGGCCTA CGTGGAGACG 
GTGCGCAACA CCCCGCTGCT CATCCAGTTG TTCGTGGTCT ATTTCGTGTT GGCACCGGTG 
CTGGGGCTGG GACGCTTTGC AGCCGGGGTG CTGGCCCTTT CGCTGTTCGA GGGGGCGTAC 
ATTGCCGAAA TCCTGCGCGC GGGCATTCTT TCCGTACCCA CGGGACAGTG GGAAGCTTCA 
CGCAGCCTTG GCATGGACGT GCCCGGAACC TATATGGAGG TGGTGCTGCC CCAGGCGGCC 
CGCACCGCCC TGCCCCCCCT GACCGGGCAA CTGGTCTCCC TGGTCAAGGA TTCGTCCCTG 
GTCAGCACCA TCGCCCTGCA CGATCTGGCC ATGCAGGCCC AGGCGGTGGC CGCCGACACG 
TTCCTGGTGT TCGAGGTCTG GTTTCTCGTG GCGGGCATGT ACCTTGCCCT CACGCTGTCC 
CTTTCGGCCC TGGCGCAGTT GCTGGAGCGA CGCCTGCGCT ACGAATTCTG A
 
Protein sequence
MLRHRMENSR HSRDSSAPGH PTAHGTGTDA PGDSSRPNPA PPARQAPEVP APPPARRALL 
AVLGDVTRYC CLLGALTWIT LRGTAASGYD WQWHRLWRHL FTTAGDGGLR AGPLLDGLGV 
TVQVVAASLG LALLAGLLAA LLRQSGSRVG RALAVAYVET VRNTPLLIQL FVVYFVLAPV 
LGLGRFAAGV LALSLFEGAY IAEILRAGIL SVPTGQWEAS RSLGMDVPGT YMEVVLPQAA 
RTALPPLTGQ LVSLVKDSSL VSTIALHDLA MQAQAVAADT FLVFEVWFLV AGMYLALTLS 
LSALAQLLER RLRYEF