| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_2678 |
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| Symbol | |
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| ID | 7174616 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011769 |
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| Strand | + |
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| Start bp | 3382609 |
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| End bp | 3384705 |
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| Gene Length | 2097 bp |
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| Protein Length | 698 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 643541210 |
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| Product | PAS/PAC sensor signal transduction histidine kinase |
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| Protein accession | YP_002437085 |
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| Protein GI | 218887764 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 70 |
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| Fosmid unclonability p-value | 0.351001 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCCTGC CCCGCCGTCT GCCCTCGCCC GTGGCCGCGC TGCTGTCCCA GATTGCCGAT
GTTCCCGGCG TGCCGTATGC CCCGCCCGAT CCGTTCTCCC CGCCCGCATC CGCGCCCCCC
CCCGGTGTCG CAGGTGGCAG AATCCATCCG TCACCGCCCG ACGTGGCGCC CATGGGCGGC
TTCAGCTACG CCGCCTCGGT CATCCTGCCC CAGACCGGCT GGCACGCCTC GGAATTCCTG
CCCCGCCTGG TGGGGGAACT CTCCTCGCCC GGCAACCTTT CCGTGCTCGA ACGCGAGATG
CATCGCCAGG CGACCGGCGC ACCTACGCCG TATTCCCTGG CCCTGCGCGG CGAAACCGGC
ACTCCGGTGG AGTTGCTGGT TACCCCGCGC CCATTGCGTG GGGTTGCGAC CGGGACTGAA
GGCGAAGGCC CGGTGCTTTG CGCCACCCTG ACGGCAACCC CGCTGCCCAG CCAGTCCAGC
GAGGGGCCCG CCCCCGCATG GAGCGAGCGG ACCCGGCTGC TCAACCTGTT GGACCGCCTG
CCCGCCTATG TGGTGCTGCT GGGGCCGGAT TATTCCATCC GCTATGAAAA CAGGGGTTTC
CGCCAACTGT TCGGCCCCGG CGTGGGGCGC CCCTGCTACG AGGTGATTCG GGGCCATAGC
CAACCCTGCG CGCTGTGCCC GCCCTTCGAC GTGTTCGATT CCCGCACCCT GTGCGTGTGC
GAGTGGGCCT GTCCGGACCG CCGCTCCGCC TTCCGCATCT ATTCCTATCC CTTCGAGGAC
GTGGACGGGT CGCCACTGGT GCTCAAGCTG GGCATCGACA TCACCTCCGG GGTGCGCGCC
CAGGAGGCCC TGTCCATCAG CGAGGGGCGT TACCGCTCCA TCACCGACAA CCTCACCCTG
GGCATTGCCG TGCTGGACAG GGCCCTGGGC ATCACCGCGT CCAACCCTCG CCTGCGCGAA
TGGTTCGGCG ACGCGGCGGC GCCCGGCGGG CTGCTGTGCC GCATGCTGGC CGAGCACTGC
GGCGAGGACA ACACCCGCTG CCCCGGCTGC GCCTGTCTGG CCACCTTTCG CGACGGGCAG
ACCCACGAAT GGCGGCTGGA GACCACGGCC CGTTCCGGCG GGCGGCGGTC GTACCGCCTG
ACGTCGTGCC CCATCCTGGC GGGCGACGGC GGGGTGGATT CGGTCATCGT CATGCTGGAG
GACGAGACCG ACCGCCTGCG CGTGGAGGAA CGGTTGCAGC GTGCCCGCAA GCTGGAGGCC
ATGGGCACCT TGGCCACGGG CATCGCCCAC GAGATCAACC AGCCCCTGTC GGCCTTGCAG
CTGTACGCGG GCAGCCTGGA AATGCTGGCC GAAAAGGACC GCGCCCCGGA CCGCGAAACC
CTGCTGGCCC GCCTTTCGCT GATCCTTGGC GAGACGGCGC GCATCCGCGA CATCATCGAC
CACATGCGGG CGTTGGTTGC CCACGGCGAC ACGGCCCTTT CGCCTACCCA GGTAGAGGCG
GCGGTGGACC GGGCGCTGGG GCTGGTGGGG GCGCAACTGC GCGCTCACCA GGTAACCGTG
GATCGCGCGC TGCCGCCGGA CCTGCCCGCA GTGCGCGCCA ACCCGGTGCA ACTGGAGCAG
GTGGTGATCA ATCTGGTGGT CAACGCCATG CATGCGCTGG ATGCCCGTGA ACCGGCGGGC
GGGCAGGACA GGCGCATCCG CATCGAGGCT GCCTACCGGC CCGCGCCGCG CGGCGGGGCC
GAACGGCCCG AACTGCCAGA TAGGCCAGAC AGGCCAGACA GGGCGGAACG ACCGGAGCAT
GGCGACGGGC AGGGGGCATG CCCGGCGGAC GGCGAGGCCC CGGCGGGCCG CGTGCTGCTG
ACCGTGGTGG ACAACGGGCC GGGGCTGCAA GGCCTGGAAG ATAGGGTGTT CGATCCCTTC
TTCACCACCA AGGGGCCACA CAAGGGGTTG GGGCTTGGCC TCGCCATCGT GCACAGCTTC
GTGGAATCAT GGGGCGGCGA GATTTCCGTG TCCGGGGGCG AGCCGCCCAT GACCGGCGCG
GCGTTCACCC TGGCCTTGCG CCGGGCCTCG CCGCCGGAGT CTGGTTCCGA CGGGTAG
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| Protein sequence | MRLPRRLPSP VAALLSQIAD VPGVPYAPPD PFSPPASAPP PGVAGGRIHP SPPDVAPMGG
FSYAASVILP QTGWHASEFL PRLVGELSSP GNLSVLEREM HRQATGAPTP YSLALRGETG
TPVELLVTPR PLRGVATGTE GEGPVLCATL TATPLPSQSS EGPAPAWSER TRLLNLLDRL
PAYVVLLGPD YSIRYENRGF RQLFGPGVGR PCYEVIRGHS QPCALCPPFD VFDSRTLCVC
EWACPDRRSA FRIYSYPFED VDGSPLVLKL GIDITSGVRA QEALSISEGR YRSITDNLTL
GIAVLDRALG ITASNPRLRE WFGDAAAPGG LLCRMLAEHC GEDNTRCPGC ACLATFRDGQ
THEWRLETTA RSGGRRSYRL TSCPILAGDG GVDSVIVMLE DETDRLRVEE RLQRARKLEA
MGTLATGIAH EINQPLSALQ LYAGSLEMLA EKDRAPDRET LLARLSLILG ETARIRDIID
HMRALVAHGD TALSPTQVEA AVDRALGLVG AQLRAHQVTV DRALPPDLPA VRANPVQLEQ
VVINLVVNAM HALDAREPAG GQDRRIRIEA AYRPAPRGGA ERPELPDRPD RPDRAERPEH
GDGQGACPAD GEAPAGRVLL TVVDNGPGLQ GLEDRVFDPF FTTKGPHKGL GLGLAIVHSF
VESWGGEISV SGGEPPMTGA AFTLALRRAS PPESGSDG
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