| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_2671 |
|---|
| Symbol | |
|---|
| ID | 7174609 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011769 |
|---|
| Strand | - |
|---|
| Start bp | 3373042 |
|---|
| End bp | 3374847 |
|---|
| Gene Length | 1806 bp |
|---|
| Protein Length | 601 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 643541203 |
|---|
| Product | Aldehyde ferredoxin oxidoreductase |
|---|
| Protein accession | YP_002437078 |
|---|
| Protein GI | 218887757 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG2414] Aldehyde:ferredoxin oxidoreductase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 59 |
|---|
| Fosmid unclonability p-value | 0.0180297 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCGCTA GCGCCACCGC CTCGCGCGTG CTGCACGTTG ACCTGGCCAC CGGGGCCTCG
CGCGTCATCC AGTTCGAGGG ACGCCCCCTG CACCTTGGCG GCAGCGGCCT GGCCGCCGCC
CTGTACGAGG CCTACGGCCT GCCCGGAGCG CCCGCCGAAG ACCCGCGCCA GCCGCTGATC
TTCGCCGTCG GCCCGCTGAC CGGCTACTAC CCGCTCATGA GCAAGGTGGT GTGCGGGTTC
CGTTCGCCCT ACAACGGGCA ATGGGCCGAA AGCCACGCCG GTGGCCGACT GGCCCTGGCC
CTGCGCTTTG CCGGGTACGA CGCGCTGATG ATCACCGGTG CGGCGCGCAC CCTGTCCTGC
CTGGTGGTGG GGTCGCGCCG GCTGGAGGTG CACGACGTGC ACTACCTGCG CGGCCAGGAC
GTGTTCGTCA CCGGCAAGTA CCTGCGCCGC TTCGGCAAGG ACAGTTCAGG CCACCGCTCC
ACGGTGCGCA TCGGCCCGGC GGGCGAGAAG GGCGTGGCCT TCGCCTGCGC CAACGTGGAT
TCCTTCCGCC ATTTCGGGCG GCTGGGGGCT GGCGCCGTGA TGGGCGCCAA GAACCTCAAG
GGCGTCGTGG TACTGGGGGA CGGCGGCGCC GCCCTGCCGG AAGGCAAGGA CTACCCCAAG
CTGTTCCGGG ACATCTACGG CGCCGTCACC GGCACCGACA TGATGCAGAA GTACCACGAC
CTCGGCACGG CGGAGAACCT TTCGGTGCTC AACGAGCTGA AGGCCCTGCC CTGGCGCAAC
CTGCAAGCCA CCACCGATCC GGCCATCGAC GGCATTTCCG GCGAACGCTT CGCCGAACAG
CTGCTGTTGC GCCAGACGGC CTGCGCGGGC TGCCCCGTGG GCTGCATCCA CATCGGCCTG
CTGCGCCAGC AGTTCGCGCG GGACCACGAG TTCCTGTACA AGCAGGTGTC GTACGACTAC
GAACCCATCT TCGCCCAGGG GTCCATGCTG GGGCTGACCA ACGCTTCCGA CGTGCTGGCC
CTGCTGGACG ATACCGAAAA GCTGGGACTG GACTGCATGA GCGCGGGCGT GGCCCTGGCC
TGGGCCACGG AAGCCCTGGA ACGCGGCGTG ATCACAGAGG CCGAGACCCT CGCCCCGCTG
GCCTTCGGCA ACGTGGCGAC CTACATGACC GGGCTGCACC ATCTGGCCAA CGGCGCCAAC
GAATTCTGGC GCACCCTGGG CCGGGGCACC CCCTCTGCCA CCGACGCATA CGGAGGCCGC
GAGTTTTCCT GCGTGCTGGG GCAGGAAATG GCGGGGTATG CCACGGGCGA GGTGTTCTTC
GTGGCGCAGG CGCTGGGCTT TCGCCATTCG CACCTGGACA GCGGCGGCTA TTCCTTCGAC
CAGTCCGTTC CCCCGCGCGA GCCGGGCACC TTCCGCACGC CAGAGGAAAT CACGGCGGAC
GTGGACAAGG CCGTGGCCTT CCTTGCCGAC GACGAACAGA AGCGCATCGC CATCAACTGC
ATGGTGGCCT GCCTGTTCTC GCGCAAGGCC TATTCCATGC CCCGCCTGCA AGAGGCGCTG
GCGGCCATCG GCTGCCGGGC AGAGGCAGAC GGCATGCCCG ACGCCCTGCG CAACGTGCAG
GCGGCGCGCT GGCGGCTGAA GCTGCAAACC GGCTATCGGC CCGAGGAAGT GACCATTCCC
AAACGCTTTA CCGAAATCGT CACCTGGAAG GGCCCCATCG ACACGGCCTA CATGGAGGCC
CTGCGCCTGG CGTACGTGGA CGCCATCCGC CGCATGGCGG ATGCTCCCGC CCCGGCGGCG
GGCTGA
|
|---|
| Protein sequence | MPASATASRV LHVDLATGAS RVIQFEGRPL HLGGSGLAAA LYEAYGLPGA PAEDPRQPLI
FAVGPLTGYY PLMSKVVCGF RSPYNGQWAE SHAGGRLALA LRFAGYDALM ITGAARTLSC
LVVGSRRLEV HDVHYLRGQD VFVTGKYLRR FGKDSSGHRS TVRIGPAGEK GVAFACANVD
SFRHFGRLGA GAVMGAKNLK GVVVLGDGGA ALPEGKDYPK LFRDIYGAVT GTDMMQKYHD
LGTAENLSVL NELKALPWRN LQATTDPAID GISGERFAEQ LLLRQTACAG CPVGCIHIGL
LRQQFARDHE FLYKQVSYDY EPIFAQGSML GLTNASDVLA LLDDTEKLGL DCMSAGVALA
WATEALERGV ITEAETLAPL AFGNVATYMT GLHHLANGAN EFWRTLGRGT PSATDAYGGR
EFSCVLGQEM AGYATGEVFF VAQALGFRHS HLDSGGYSFD QSVPPREPGT FRTPEEITAD
VDKAVAFLAD DEQKRIAINC MVACLFSRKA YSMPRLQEAL AAIGCRAEAD GMPDALRNVQ
AARWRLKLQT GYRPEEVTIP KRFTEIVTWK GPIDTAYMEA LRLAYVDAIR RMADAPAPAA
G
|
|---|
| |