| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_2640 |
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| Symbol | |
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| ID | 7174578 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011769 |
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| Strand | + |
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| Start bp | 3337856 |
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| End bp | 3340723 |
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| Gene Length | 2868 bp |
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| Protein Length | 955 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 643541172 |
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| Product | PAS/PAC sensor signal transduction histidine kinase |
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| Protein accession | YP_002437047 |
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| Protein GI | 218887726 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2202] FOG: PAS/PAC domain
[COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 89 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAGCCG ACGGCCACCA CGATCACGGC ATCGCCGCAA CGGGGCAGGA TTCCACGCAT
TCCGATCGTA CGGATGGCCC CGGCAATGTT CCCGGCGGCG CTCCGCCGGA TTTCCCGCCC
GGTGCCGCGC GCTGTGGGCC GTCCGATGTG CCGACGGGTG AGGACTCCGC TGACGTGGCC
CAGCAACACC GCCTGCTGCT GGAGCATCTG CCCGGCGGCT ATTCACTGCA CGAAATGCTC
TGGGACGAGC ACGGACAGCC GCGCGACTAC CGGTTTCTCG ACGTCAATCC CGCCTTCGAG
GACATGACCG GCCTTTCCCG CGAAAGGGTG CTGGGGCGTA CACTGCTTGA AGTGCTGCCC
GGCATCGAGC GCAAGTGGGT GGACATCTAC GGCAGGGTGG TCTCCACCGG CCAAAGCGCC
TCCTTCGAAC ACCGCGACGA ACTGTTGGGC AGGCACTGGG ACGTGCGGGC CTGGCGCGCG
GGGCCGAACC GGTTCGCGGT GGTCTTTTCC GATGCCACCC GCTGCCGGGT CATGGAGGGC
GAACTGCGCC GCTCGTCGGC CATGCAGCGG GCCATGATCC GCAACATCCC CTTCGATTTC
TGGGCCCGCG ACGCCAGTGG CCGCGTGGTC ATGCAAAGCG ACATTTCCGT GGCCCTGTGG
GGGGATCTGA CCAACTCGCC CGACAGCGAG CGGGACGTGC CGCAGGCCAC CCGCGCCGGG
TGGCAGGACA TCAACGCCCG AGCCATGGCG GGCGAGACGG TGCGCCACGA GCACGAGGTG
CAACTGCCGG ACGGCGCCCG ACGCGTCTTT GCCAGCATGG TAACCCCCAT CCGCGACGAG
ACGGTTGACG GTCTGCTCGG CATTCTCGGC ATCAACATCG ACATCACCGA ACAGCGCGCC
GCGGAACAGG CCCTGCGCCG CAGCGAGGCG CGGTTCCGCT CGCTGATAGA GAACGCCCTG
AACCTGCCGG TGCAGGGTTA CGACCGCGAG CGGCGGGTGT TCTTCTGGAA CGCCGCCAGC
GAACGGCTGT ACGGTTTCAC CCACCAGGAG GCAGTGGGCA GGCGACTGGA GGAACTGATC
ATTCCCGAGG ACATGGCCGA CGAGGTGTGC CGCGACATGG CCCGCTGGGT GGAAACCGGC
ATCGCCCCCC GCGCGGGCGA ATTGCGCCTG CGCCACAAGG ACGGCGGCCC GGTGGCGGTG
TATTCTTCGC ACGTGGCGTT GCAGGGGCCG GGCGGCGAGC CGGAGATGTA CTGCATCGAC
GTGGATCTCA ACAACCTGCG CCGCGCCGAA CTGGCCCTGC GCGAGAGCGA GCAGCGCTTC
CGCACGCTGG TGGCCAACCT GCCGGGCGTG GTCTACCGCT GCGAGGCCAC GTCGCCGTGG
CGGGCGCTGT TCGTCTCTGA CCAGGTGGAA CAGTTGACCG GGCATCCGGC AACGGAATAC
CTGCGGGGCG GCCTGCCCCT TGAACACATC ATCCACCCCG ACGACCGCGC CGGGGTCATC
GCGGACATGG CGGCGGCCAC CGATCCGGAC GGGTATTTTT CGCTGGAATA CCGGGTGCTG
CACGAGGACG GCACCCAGCG CGCGGTCATT GAACAGGGGC GGCGGGTGCA CGACGAGGCG
GGCAGGGAGT TTCTGGACGG GGTGATCCTG GACGTCACCC CCCTGCGCCA GGCGCTGGGC
GACCTTGCAG CCGCGCGCGA CTTTCTGGAC GCGGTGATGG AGGCCATGCC CTCGGCCCTG
GCCGGGGTGG GGCCGGACGG TCTGGTCATC CACTGGAACC GCGCGGCGGA AGAGGCGTCC
GGCCTTTCGC GCGATGCCGC GCGCGGGCGC CCGGCAGCTG AAGTGCTGGC CCGGCTGGTG
GGCGCGGCCC CCCAGGTGCA CGAGGCCGTG GCCCGGCGGC AGGCCGCCCG GTTCGAGGGG
GTGCCCCGCG TGACGGACGG GCGGCTGCGC CATCTGGACG TGATGCTGTT TCCCCTTTCG
GGGCAGGGTG CCGCGCCCGG CGTGCCGGGG GCCGTCATCG TGCGGGTGGA TGACGTCACG
GAGCGCGCCC GTCTGGCCGA CATGCTGGTA CAGACCGAAA AGATGCTGTC CGTGGGGGGG
CTTGCGGGCG GCATGGCGCA TGAGCTGAAC AACCCGCTGG GGGCGGTGTT GCAGGGCGTG
CAGAACATCA TCCGCAGGCT GGACCCGGAT ATGGCCGCCA ATGCACAGGC CGCGCGCGAT
GCCGGGGTGT CCCTTGTGGC CATGCGCTCC TACATGGAGG CCCGGCGCAT TTCCGAAATG
CTGGAAGGCA TTCGCGATGC GGGCGTCCGC GCGGCGGACA TCATCGCCAC CATGCTGGAA
TTCACGCGGC CTGGACAGGG GCGGCGCACC ACGGCGCGGG CGCACGCCCT GGCCGAACGG
GCGCTGGCCC TGGCGGGCAG CGACTACGAC CTGCGCCGCC AGTACGACTT CCGCAAGCTG
CACGTGGTGC GCGATTACGC CGAAAGTGCC GATACCCTGA CCTGCGTGCC CACAGAGATC
GAGCAGGTGT TGCTGAACCT GTTCAAGAAC GCGGCCCATG CCATGGCGGA AAAGGACTAT
CCTGCCGGAC AGACCCCCGC CCTGCACGTG AGCACCCGGC GCGAGGGCGA CGAGGTGGTC
ATCGTGGTCG AGGACAACGG GCCGGGCATG GAGCCGGAGG TGCGGCGGCG GGTGTTCGAG
CCGTTCTTCA CCACCAAGCC TCCGGGCGTG GGCACCGGGC TGGGACTTGC GGTCAGCTAC
TTCATCGTGG TGCGCACCCA CGGTGGCAGC ATTACCTGCG ACGGCGTGCC CGGCGAGGGC
GCCCGGTTCA CCGTGCGGCT GCCTGCCCGG CAGGCGGTGG ACAGCTAG
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| Protein sequence | MAADGHHDHG IAATGQDSTH SDRTDGPGNV PGGAPPDFPP GAARCGPSDV PTGEDSADVA
QQHRLLLEHL PGGYSLHEML WDEHGQPRDY RFLDVNPAFE DMTGLSRERV LGRTLLEVLP
GIERKWVDIY GRVVSTGQSA SFEHRDELLG RHWDVRAWRA GPNRFAVVFS DATRCRVMEG
ELRRSSAMQR AMIRNIPFDF WARDASGRVV MQSDISVALW GDLTNSPDSE RDVPQATRAG
WQDINARAMA GETVRHEHEV QLPDGARRVF ASMVTPIRDE TVDGLLGILG INIDITEQRA
AEQALRRSEA RFRSLIENAL NLPVQGYDRE RRVFFWNAAS ERLYGFTHQE AVGRRLEELI
IPEDMADEVC RDMARWVETG IAPRAGELRL RHKDGGPVAV YSSHVALQGP GGEPEMYCID
VDLNNLRRAE LALRESEQRF RTLVANLPGV VYRCEATSPW RALFVSDQVE QLTGHPATEY
LRGGLPLEHI IHPDDRAGVI ADMAAATDPD GYFSLEYRVL HEDGTQRAVI EQGRRVHDEA
GREFLDGVIL DVTPLRQALG DLAAARDFLD AVMEAMPSAL AGVGPDGLVI HWNRAAEEAS
GLSRDAARGR PAAEVLARLV GAAPQVHEAV ARRQAARFEG VPRVTDGRLR HLDVMLFPLS
GQGAAPGVPG AVIVRVDDVT ERARLADMLV QTEKMLSVGG LAGGMAHELN NPLGAVLQGV
QNIIRRLDPD MAANAQAARD AGVSLVAMRS YMEARRISEM LEGIRDAGVR AADIIATMLE
FTRPGQGRRT TARAHALAER ALALAGSDYD LRRQYDFRKL HVVRDYAESA DTLTCVPTEI
EQVLLNLFKN AAHAMAEKDY PAGQTPALHV STRREGDEVV IVVEDNGPGM EPEVRRRVFE
PFFTTKPPGV GTGLGLAVSY FIVVRTHGGS ITCDGVPGEG ARFTVRLPAR QAVDS
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