| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_2637 |
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| Symbol | |
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| ID | 7174575 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011769 |
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| Strand | + |
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| Start bp | 3333700 |
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| End bp | 3335124 |
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| Gene Length | 1425 bp |
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| Protein Length | 474 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 643541169 |
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| Product | diguanylate cyclase with extracellular sensor |
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| Protein accession | YP_002437044 |
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| Protein GI | 218887723 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 85 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCAGCC GGTTGTCCCT GGTGCTCTTC CGCATCCTCC CGCTCGCAGT GCTGTTGGCA
GGGGCATTTC CCGGCATCTG CCGGGCGGAT TCCGGCCCCG CTGACGTGCG GTTCACCCCG
GCGGAGCAAC GCTTCATCCG CGAAACCGGC CCCATCACCC TGTGCGTGGA CCCGGATTGG
CCGCCTTTCG AACGGGTAGA GGTACACAAC GGCCAGCCGC GCCATGTGGG CATTGCCGCT
GACATCATCG CGCTGGTGGC GCAACGTACC GGCCTGACCT TCGAGTTGGT GCCCACGGCC
TCGTGGGATG AAAGCATCGC CGCCGCGCGG GAGGGGCGCT GTCAGGTGCT CAGCTTCCTG
AACCAGACGC CGCAGCGAGA GGCATGGCTG GGCTTCACCG ACCCACTGCT GACCGACCCC
AACGTGTTCA TCACCCGCAC GGAGCACCCG GCCATCATCG ACCCGGCGGC GCTGGAGGGC
GCGACCATCG TGTTCCCCCG GGGCACGGCC ATGGAAGAGC TGGTCCGCAA GGACTACCCC
AACCTGAAGG TGCTGGTGAC GGAGTCGGAG GCCGAGGCCA TCCGCATGGT GGAGGAACGC
AAGGCGGACA TGACCATGCG TTCGCTCATC GTGGCGGCAT ACACCATTCG CCAGCAGGGG
TTGTTCAACC TGAAGATCGC GGGCAAGCTA CCGGAATACG AGAACAAGCT GCGCATGGGC
GTGGTGCGGC ACGATCCCTT GCTGCGCACC GTGCTGAACC GGGGCATCCG TTCGCTGACG
CTCGAGGAGC GCCAGCAGAT CGTCAACCGG CACGTGCCCA TCACCGCCCA GACGTCGGCG
GATTACTGGC TGGTGGCCCG CGTGGCCGGG TTTTTCGCGC TGCTGGTGGG GGTGGTGCTG
TGGTACAACC GCAGGCTCAA GCGCATGAAC GCGGTGCTGG AGCGCCTGGC CCGCACCGAT
CCGCTCACCG ACCTGCCCAA CCGCAGCCGC CTGAACGAAC TGTTCCGGCG CGAGGTGGAA
CGGGCCCAGC GCTATCGGCG TCCCTTTTCC ATCGTCATCC TGGATATCGA CCATTTCAAG
CGCGTCAACG ACGAGCTTGG CCACCTGGCG GGCGACAGGA CCTTGCAGGT CTTTGCCGGG
GTGGTGCGCG ACAGCGTGCG CGGGACGGAT ACCGTGGGCC GCTGGGGCGG CGAGGAATTC
CTGGTGCTCT GCCCGGAAAC CACGGCGGAA GAGGCCGTGC AACTGGCGGA ACGGTTGCGG
GGCTCGTTGC GGGCCACGCA GTTCGAGGGG GGGCGCATCC ATACCCTCAG TGCCGGCGTG
GCGGCCTTCC GCGAAGGCGA CAGCGTGGAT ACGCTGCTGC ACCGGGCGGA CACTGCCCTG
TACCGCGCCA AGAATGGCGG GCGCGACCGG GTGGAGGTGG AGTAG
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| Protein sequence | MFSRLSLVLF RILPLAVLLA GAFPGICRAD SGPADVRFTP AEQRFIRETG PITLCVDPDW
PPFERVEVHN GQPRHVGIAA DIIALVAQRT GLTFELVPTA SWDESIAAAR EGRCQVLSFL
NQTPQREAWL GFTDPLLTDP NVFITRTEHP AIIDPAALEG ATIVFPRGTA MEELVRKDYP
NLKVLVTESE AEAIRMVEER KADMTMRSLI VAAYTIRQQG LFNLKIAGKL PEYENKLRMG
VVRHDPLLRT VLNRGIRSLT LEERQQIVNR HVPITAQTSA DYWLVARVAG FFALLVGVVL
WYNRRLKRMN AVLERLARTD PLTDLPNRSR LNELFRREVE RAQRYRRPFS IVILDIDHFK
RVNDELGHLA GDRTLQVFAG VVRDSVRGTD TVGRWGGEEF LVLCPETTAE EAVQLAERLR
GSLRATQFEG GRIHTLSAGV AAFREGDSVD TLLHRADTAL YRAKNGGRDR VEVE
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