| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_2537 |
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| Symbol | |
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| ID | 7174473 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011769 |
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| Strand | - |
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| Start bp | 3202729 |
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| End bp | 3206397 |
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| Gene Length | 3669 bp |
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| Protein Length | 1222 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 643541067 |
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| Product | PAS/PAC sensor hybrid histidine kinase |
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| Protein accession | YP_002436944 |
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| Protein GI | 218887623 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 89 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTCGTC AGGATCATGA AGCCCGCCAG TCTGGACAGG CAGAGCAGGC CGGGCAGGCC
GGACAGGCGC CTTCGCCCGA CGCGGCTTCC GCCTCGGGGC CGAACCATCC GGCCAATCCC
GAAAGACTGC CCCCCGACCG GCAGGGCGAC CCCATTCCTC TCTTCGAGCA CAGCGTGGCC
CCCATGCTGC TGGTGGACCC GGAAAACGGC ACCATCGTGG ACGCCAACCC CGCCGCCTGC
CGCTTCTATG GCCACCCGCG CGAACGCATG GCGGGCATGC CCATAGCCGC CATCAACACT
CTGGACGAAG ACCAACTGGC CGCGCACTTG GACGAGGCCT TCCACCGCGA ACGCACGGCC
TTCCGGTTCC GCCACCGGGC TGCGTCGGGC CTGGTGCGCG AGGTGGAAGT GCACAGCGGT
CCGGTGTGGC TGAATGGCCG GGTTCTGCTG CATTCGGTGG TGCACGACGT GTCGTTCCTG
CACGATTCCG CGCAGCGCGT GGAACGGGTG CAGCGACTCA ACGACCTGCG CGCCGCGCTC
ATCCACAGCG GAGCGCCGGA GGAAAAGCTG CGCCTGCTGG CACGGGAAAT CCTGGCCATC
TTCGGTGCCG GGACCTGCCG CATCTGGCTG GCCCGGCAAG GTGACCGCTG CGCCCAGTGC
CCTCACGCCG GGGCTCCATG CCCCACGGCG CCGCGCACCC CACCGGTCTG CCTGCACATG
GTGGTGGAGG AACCGGCCTC GCCCTCCTGC CAGTCCGCCG CGGCGGAACA GGCCCGGCCC
GACCCGCGCA TCATCCGCAT TCCCTTCCGG CATGGCCCGG TGGGCCGCGC TGCCTCGGCC
AGCACGCGAC GCCCGGTGCT GCACGCAACG CCGGAAGCCG ACGCCCCCCT GTCCTGCGAT
TGCGGCATGT TCACCGCCTA CGCCATCCGC ATCGGACAGG GCATTTCCGG CGGGGTGCTG
GGCGTGCACC TGCCCGCCCT GGACCCCATC ACCGACATGC AACTGGAAGG GCTTGCCCAT
ACCACGGCGC ACCTGTTGCA GGCGGCCCGC ACCGCCGAGG CCACGCGCAG GGCCCTGCGC
GGCCTGGACA ACCGCATCCG CAAGCGCACC GCCCAGCTGC GCCGCGCCAA CCAGTTGCTG
CGGCACGAAG TGGCCGAACG CCGCCGGGCC GAACTGGCCC TGCGCCGCAG CCGCGACCTG
CTGGAACACG GCGAGCGCGT CGGCCAGCTG GGCAGCTACT GGCGCGACCT GGAAACCGGT
CGGGGGCAGT GGTCGGACAA CCTGTTCCAC ATGTTCGGCT TTCCCGTGGC GACGGAGGCG
CCTTCGTTCG CAGGAGTCTT CGAGTGTATC CACCCGGACG ACAGGGTGCG GATAGCCGAG
CAGTTGCACC ACGTCATGGC CCATCGGACC AGCGCCCTCA TCGAATACCG TTACCGGGGG
GCCGCCGGAC AATACCGCCA CGCCCGGCAG CAGATGACCT TCGACACGTC GGCCCGCACC
GGACACAGGG AGCCGGTGGT GATGCTCGGC ATGGTCCAGG ACATCACCGA GCAACGCCAG
CGCGATGAAC TGCTGCGCCT GCAACGCGAC CTGCTGCTGG CGCTTGGCAT TACCACCACG
GTGGAGGACT GCCTGGGGCT GTGCCTGCGC ACCGCCCTGC GCGCCGAAAG CGTGGACGCG
GGCGCGGCAT GGCTGCGGGT GGATCTGCCC GACCTTCCCG ACCGGACCGA CCTTCCCGAC
CGGCCCGAAG ACCCCGCCGG GCATGGCGCA CGCGGTGGTC ACGCGCGACA CGAATGGCGG
CTGGTGGCGG CGCAGGGGTT CAATCCGGCG GTACTGGACA GGGTGCGCTG CCTGCCTTCG
GGCACCCCCG CCACGCGCCT GATGGAGGCG GGCCGCCCCG TGCCCGAGAC GCATCCTGAA
CAGGAATCAT GCTGCATGCT TACCGGCGAC GTGGAGTTGG ACGCGCTGGC CACCGCCTCG
TCCGTCTGCT GCTCCCACCT CCTGCCCATT CTGCACGATG GCCGGGCCGT TGCCTGCCTG
CTGACGGGTA CGCGCGGCCC CGGCCCCATG CGCAAGGCCG CCCGCCACCA TGTGGAGGCC
GTGGCCGCCC AGGGCGGCAG CGCCTTTGCC CGGATCATGC AGCAGCAGTC GCTGCGCGAG
AGCGAGGCCA ACCTGCGCGC CCTGCTCAAC GCGCCGCGCC TCAGCGCCTT CCTGCTCGAC
CCTGCGGGCC GGGTGCTGGC CTGCAACGCC ACCGGCGCCG GTCGACTGGG CACCACTCCG
GACGCCATGC TGGGGCGGGC GCTGGGGAAC TACGTTCCCC ATGACCTGCG CGACAGGCGG
ACCAATGTGC TGTCCAGCGT GGTGGCAACG GCAACCCCGG CCACGTTCCG GGATGCGCGA
AGCATCCACA TATTCGAACA CACCCTGTAC CCCATCACCG ACGAAACGGG CCGCGTGCAC
CGGGTGGCCT GGCTGGCCGA GGACGTGGCC CACGAAGTAG CGCTGGAGCG GCAACTGCGC
CAGGCCCAGA AGATGGAGGC CGTGGGCACC CTTGCCGGGG GTATCGCCCA CGATTTCAAC
AACATCCTTG GCGTGATCAT GAGCAACATC GAAATGCTGC GCGACACGGG GCTTACCGGC
AGGGCCGCCA CCCGCGCCGA CCGCATCCTG CGCGCCGCAT TGCGGGCGCG CGACGTGGTG
CGCCAGTTGC TGGCCTTCGG TCGCCCGGCG GACGAACCCT ACGCCACCCT GGACCTGTGC
CGCACCGTGG CCGACGCCCT GCACATGGTC AAACCGTCCA TCCCGGCCAG CGTCACCCTG
CGCACCCTGC TGCCCGTCGC CCCGCTGCCG GTGCATGGCG ACATCACCCA GATACACCAG
GTGCTGCTGA ACCTGTGCAC CAACGCCGTG CATGCCATGC CCGACGGCGG CGTGCTGGAC
GTTTCGCTGG CAGCGCTGGT CCTTGGCGGC GACGAGGTGC TGCGCGGCTA CCCGGAGCTG
TCACCCGGAC GGTATGCATG CCTTTCGGTG GCCGATTCCG GTCAGGGCAT GACCGCCGCC
CAACTGGAGC GGGTATTCGA GCCGTTCTTC ACCACCAAGC CGCAGGGCAT GGGATCAGGC
CTTGGGCTCA GCATGGTGCA CGGCATCGTC CGCCAACATG GCGGCACGGT GCGCGCCCAT
TCCCAGCCGG AGCAAGGGGC GTGCTTCGAC GTGCTGCTGC CCCTTGCAGA CATGCTGGCG
GCTGCGGAAG CAGGTGCCGC CCCCGCAGCC ACCGCTCCGG AATACGTGCC CGACACGCCG
CAGGAGCGTC CGCTGCATGT GCTGGTGGTG GATGACGAGC ACGACTTCCG CCAGTCCGTG
GCGGAAATGC TGCATGCCCT CGGCCACCGG TCCACAGGTA CCAGCGATGC GAGTGACGCC
TTGCAACTGC TGGCGGCAGG CCGCTACGAC GTGGCCCTGC TGGACCTGCG CATGCCCGGC
GGTTCCGGCA CGGAGCTGGC CCGCGCCATC CGGGCGCGCG GTTTTGCACT GCCGCTGGTG
CTGTGCACCG GCAACGAATG CGACATCCCT CCGGAAGAAC TGGCGGAGAC GGGCCTGACC
CTGATAGGAA AACCGTTCAC TGGCGAAGAA TTATCGAAGC ACTTGCATGT TTCGTTGAAA
AAGGCGTAA
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| Protein sequence | MSRQDHEARQ SGQAEQAGQA GQAPSPDAAS ASGPNHPANP ERLPPDRQGD PIPLFEHSVA
PMLLVDPENG TIVDANPAAC RFYGHPRERM AGMPIAAINT LDEDQLAAHL DEAFHRERTA
FRFRHRAASG LVREVEVHSG PVWLNGRVLL HSVVHDVSFL HDSAQRVERV QRLNDLRAAL
IHSGAPEEKL RLLAREILAI FGAGTCRIWL ARQGDRCAQC PHAGAPCPTA PRTPPVCLHM
VVEEPASPSC QSAAAEQARP DPRIIRIPFR HGPVGRAASA STRRPVLHAT PEADAPLSCD
CGMFTAYAIR IGQGISGGVL GVHLPALDPI TDMQLEGLAH TTAHLLQAAR TAEATRRALR
GLDNRIRKRT AQLRRANQLL RHEVAERRRA ELALRRSRDL LEHGERVGQL GSYWRDLETG
RGQWSDNLFH MFGFPVATEA PSFAGVFECI HPDDRVRIAE QLHHVMAHRT SALIEYRYRG
AAGQYRHARQ QMTFDTSART GHREPVVMLG MVQDITEQRQ RDELLRLQRD LLLALGITTT
VEDCLGLCLR TALRAESVDA GAAWLRVDLP DLPDRTDLPD RPEDPAGHGA RGGHARHEWR
LVAAQGFNPA VLDRVRCLPS GTPATRLMEA GRPVPETHPE QESCCMLTGD VELDALATAS
SVCCSHLLPI LHDGRAVACL LTGTRGPGPM RKAARHHVEA VAAQGGSAFA RIMQQQSLRE
SEANLRALLN APRLSAFLLD PAGRVLACNA TGAGRLGTTP DAMLGRALGN YVPHDLRDRR
TNVLSSVVAT ATPATFRDAR SIHIFEHTLY PITDETGRVH RVAWLAEDVA HEVALERQLR
QAQKMEAVGT LAGGIAHDFN NILGVIMSNI EMLRDTGLTG RAATRADRIL RAALRARDVV
RQLLAFGRPA DEPYATLDLC RTVADALHMV KPSIPASVTL RTLLPVAPLP VHGDITQIHQ
VLLNLCTNAV HAMPDGGVLD VSLAALVLGG DEVLRGYPEL SPGRYACLSV ADSGQGMTAA
QLERVFEPFF TTKPQGMGSG LGLSMVHGIV RQHGGTVRAH SQPEQGACFD VLLPLADMLA
AAEAGAAPAA TAPEYVPDTP QERPLHVLVV DDEHDFRQSV AEMLHALGHR STGTSDASDA
LQLLAAGRYD VALLDLRMPG GSGTELARAI RARGFALPLV LCTGNECDIP PEELAETGLT
LIGKPFTGEE LSKHLHVSLK KA
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