| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_2533 |
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| Symbol | |
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| ID | 7174469 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011769 |
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| Strand | + |
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| Start bp | 3196674 |
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| End bp | 3199706 |
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| Gene Length | 3033 bp |
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| Protein Length | 1010 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 643541063 |
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| Product | formate dehydrogenase, alpha subunit |
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| Protein accession | YP_002436940 |
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| Protein GI | 218887619 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing |
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| TIGRFAM ID | [TIGR01553] formate dehydrogenase, alpha subunit, proteobacterial-type |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 83 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAATGA ACCGGCGGGG CTTCATCAAG CTCGCTGCCA CGGGTGCAGT GGCCACCGCG
TTCGGGGGGC TGGGCATCAG CCTTGCCCCG GTCGCGGTCC ATGCCGAAGG GTTGGCCATC
GACAAGGCCA CCCTGACCAC GTCCGTCTGT TGTTACTGCG CCGTGGGCTG CGGCCTGCTG
GTCTGGACCG ACCCCGCGAC CGGACGCACC ATCAATATCG AAGGCAACCC GGACCACCCC
ACCAACGAAG GCACCCTGTG CCCCAAGGGG TCGTCCATCT GGCAGACCGC GGAGCAGAGC
CAGCGCATCA CCAAGGTGCT GTATCGCGCC CCCGGCAGCG ACAAGTGGGA AGAGAAGTCG
TGGGACTGGG CGCTGCCGCG CATAGCCCGC AAGATCAAGG ACACCCGCGA CGCCTCGTTC
GAGGCCGTCA ACGACAAGGG CCAGCCGGTC AACCGTACCC GCGCCATCGC CTCCGTCGGT
TCCGCCGCCA TCGACAACGA GGAGGGCTGG TTGCTGCAGG CCATGCACCG CTCGCTCGGC
CTGGTGTACC TGGAGAGCCA CGCCCGCATC TGACACAGTT CCACTGTGGG GGCTCTGGCA
GAGTCCTACG GACGCGGCGC GATGACGAAT CACTGGATCG ACCTCAAGAA CAGCGACGTG
TTGCTTATCA TGGGCAGCAA CGCGGCGGAA AACCACCCCA TCTCGTTCAA GTGGGTCACC
CGTGCCCAGC AGCGCGGAGC AACGCTGATC CACGTGGACC CGCGCTTCAC GCGCACCTCG
GCCAAGGCGG ACCTGTACGC GCCCATCCGC TCGGGCACGG ACCTGGTGTT CTTTGGCGGG
CTGATCAAGC ACATTCTGGA TAACGAGCTG TATTTCAAGC AGTACGTGGT GGACTACACC
AACGCCTCGT ACCTTGTGGG GCCGGACTAC GACTTCAAGG ACGGCCTGTT CTCCGGCTTC
AACCCGGAGA CGGCCAGCTA CGACCGCAGG AAATGGGCCT TCGTCATCGA CGACAAGGGC
GTGACCCTGA AGGATCCCAC CCTGAAGGAC CCGCGCTGCG TCTTGCAGGT GATGCGCCGG
CACTACGCCC GCTACGACCT GAAGACCGTG GTGGACGTGA CCGGCATGCC GGAAGACAAG
GTGCTGGCGG TGTGGAATTC CTTCGCCTCC ACCGGCAAGC CGGACAAGGC GGGCACCATC
CTGTACGCCA TGGGCCAGTG CCAGCACACC GTGGGCGTGC AGAACATCCG CGCCCTGTCC
ATGATCCAGA TGCTGCTGGG CAACATCGGC ATAGCGGGCG GCGGGGTCAA CGCGCTGCGC
GGCGAATCCA ACGTGCAGGG CACCACGGAC ATCGCCCTGT TGTGCGACAA CCTGCCCGGC
TACCTGCCCA TTCCCCGCGC CACCTGGGCA GACTACGACG CCTACGTGAA GGCGGGCACC
CCGGTCACGG CGGATCCGCA AAGCGCCAAC TGGTGGTCAA ACATCGACAA GTACGCGGCA
TCCCTGATGA AGGCCATGTA CCCCACGGTG GACCACAAGG AAGCGTACAC CTGGCTGCCC
AAGATCGACG ACACCAAGGT GGTGGAATAC TCCTGGCTGT CGCTGTTCGA GCGCATGTAC
AACGGCGGCT TCAAGGGCGC GTTCGTGTGG GGGCAGAACC CCTGCGCGGG CGGGGCCAAC
GCGGGCAAGA ACCGCAAGGC CATGGCCAAG CTGGACTGGG CGGTGATGGT CAACCTGTTC
GAGAACGAGA CCTCGCTGTT CTGGAAGGGT CCGGGCGTGA ACCCCAAGGA CGTCAAGACC
GAGGTGTTCT TTCTGCCCGC GTGCATGAGC GTGGAAAAGG ACGGCTCGGT GGCCAACTCC
GGCCGCTGGC TGCAATGGCG CGAGAAGAGC GCCAGGTTCA TGGGCGATTC CCTGAGCGAC
GGCGACATCG TCATCCGGCT GTTCGAGGAA GTGCGCAAGC TGTACAAGGC AGAGGGCGGC
AAGTTCCCGG AACCCATCCT GAACCTTGAC ACCGCCTACC TGAAGGACGG CGCATACGAC
GCCAGCGCGC TGGCCAAGCG CCTCAACGGC ACCTTCCTGA AGGACGTGAC CATCGCCGAC
AAGCAGTGGA AGGCGGGTCA GCAGGTGCCC GGCTTTGCCG CGTTGCAGGC CGACGGTTCC
ACCGCGTGCG GCTGCTGGAT ATTCTCCGGC TGCTACACCG AGCAGGGCAA CATGATGGCC
CGGCACGACC GCACCCAGAC CCCGGAACAG GCGGCCATCG GCCTGTTCCC CAACTGGTCG
TACGCCTGGC CCGCCAACCG GCGCATCCTG TACAACCGCG CCGGGGTGGA CCAGACGGGC
AAGCCCTTCG ACCCCAAGCG CGCGGTCATT GCCTGGAACG GCGAAAAGTG GGTGGGCGAC
GTGCCCGACG GCGGGTGGAA GCCCGGCGAA AAGCTGCCGT TCATCATGGT GCGCGAAGGG
CGCGGCCAGT TGTTCGGCCC CGGGCGCGTG GACGGCCCCC TGCCGGAACA CTACGAACCC
TTCGAAAGCC CGCTGGCGGG CAACCCCCTG TCGCCGCAGC GGGTCAACCC CACGGCCCTG
CACTTCGCCC ACGAGGAAAA GGCCGTGCGC GACCCGCGCT TCCCCTACGT GTGCACCACC
TACCGGGTGA CCGAGCAGTG GCAGTCCGGC ACCATGACCC GCAAGACCGC GTGGCTGAAG
GAAATGCAGC CCGACGGCTT CTGCGAGATG AGCCGCGAGC TGGCGGCGCA ACTGGGCGTG
CAGAACGGCG ACCAGGTGGT GCTGGAATCG GTGCGCGGCA AGGTGCAGGT GGTGGCCATC
GTCACCCCGC GCCTGAAGCC GTTCACCGTC ATGGGCGAAA CCGTGCACCA GGTGGGCATT
CCCTGGCAGT TCGGCTGGGG CCAGAAGAAG AACGCCACGT TCGATTCGGC CAACCTGCTG
TCGCCTTCGG TGGGCGACCC GAACACGGGC ATTCCGGAGA CGAAAGTCTT CATGGTGAAC
GTGAGAAAAG CCCAGTCCGG GAAGCAAGGG TAG
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| Protein sequence | MKMNRRGFIK LAATGAVATA FGGLGISLAP VAVHAEGLAI DKATLTTSVC CYCAVGCGLL
VWTDPATGRT INIEGNPDHP TNEGTLCPKG SSIWQTAEQS QRITKVLYRA PGSDKWEEKS
WDWALPRIAR KIKDTRDASF EAVNDKGQPV NRTRAIASVG SAAIDNEEGW LLQAMHRSLG
LVYLESHARI UHSSTVGALA ESYGRGAMTN HWIDLKNSDV LLIMGSNAAE NHPISFKWVT
RAQQRGATLI HVDPRFTRTS AKADLYAPIR SGTDLVFFGG LIKHILDNEL YFKQYVVDYT
NASYLVGPDY DFKDGLFSGF NPETASYDRR KWAFVIDDKG VTLKDPTLKD PRCVLQVMRR
HYARYDLKTV VDVTGMPEDK VLAVWNSFAS TGKPDKAGTI LYAMGQCQHT VGVQNIRALS
MIQMLLGNIG IAGGGVNALR GESNVQGTTD IALLCDNLPG YLPIPRATWA DYDAYVKAGT
PVTADPQSAN WWSNIDKYAA SLMKAMYPTV DHKEAYTWLP KIDDTKVVEY SWLSLFERMY
NGGFKGAFVW GQNPCAGGAN AGKNRKAMAK LDWAVMVNLF ENETSLFWKG PGVNPKDVKT
EVFFLPACMS VEKDGSVANS GRWLQWREKS ARFMGDSLSD GDIVIRLFEE VRKLYKAEGG
KFPEPILNLD TAYLKDGAYD ASALAKRLNG TFLKDVTIAD KQWKAGQQVP GFAALQADGS
TACGCWIFSG CYTEQGNMMA RHDRTQTPEQ AAIGLFPNWS YAWPANRRIL YNRAGVDQTG
KPFDPKRAVI AWNGEKWVGD VPDGGWKPGE KLPFIMVREG RGQLFGPGRV DGPLPEHYEP
FESPLAGNPL SPQRVNPTAL HFAHEEKAVR DPRFPYVCTT YRVTEQWQSG TMTRKTAWLK
EMQPDGFCEM SRELAAQLGV QNGDQVVLES VRGKVQVVAI VTPRLKPFTV MGETVHQVGI
PWQFGWGQKK NATFDSANLL SPSVGDPNTG IPETKVFMVN VRKAQSGKQG
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