Gene DvMF_2513 details

Gene Information

• Locus tag: DvMF_2513
• Symbol: infB
• ID: 7174449
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Desulfovibrio vulgaris str. 'Miyazaki F'
• Kingdom: Bacteria
• Replicon accession: NC_011769
• Strand: -
• Start bp: 3167905
• End bp: 3171144
• Gene Length: 3240 bp
• Protein Length: 1079 aa
• Translation table: 11
• GC content: 69%
• IMG OID: 643541043
• Product: translation initiation factor IF-2
• Protein accession: YP_002436920
• Protein GI: 218887599
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0532] Translation initiation factor 2 (IF-2; GTPase)
• TIGRFAM ID: [TIGR00231] small GTP-binding protein domain; [TIGR00487] translation initiation factor IF-2

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 77
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGACAGACG ACAAGACCAG GGTGAAGGAC CTGTCCACGG AGCTGGGCGT GTCCACCAAA 
GATCTGCTCC ACACGCTGCG CGACCTCGAC ATCCCGGCCA AGAGCGTGAT GACCACGCTT 
ACCGCCGACG AGGTCAGCCG CGTGCGCGAA CGCCATCAGG GCCAGACCGC CGAAGCGGGC 
GTTGACCGCA AGGTGGTTCA GCCCGGCGTC ATCGTGCGCC GCCGCCGCCG CGACGGCGAA 
GAGGGCGAAG CCCCCGTGCG TCGTCGTGCC GATGAGGGCG AAGCCGCATC CGGCATTGCC 
GACGCCGAAG CGCCCGCCGC CAAGGCCGAA GCGCCCGTGC CGCCCGCAGC TGACGAACGG 
CCCGCCCGTG CCGCCCGCGC CGAAGCCCCC GCGGCGCCCG AGGCACGCCC TGCCACGCCC 
GCCGCGCGCA TCATCCGCCG CCACGACGAG CCCGCACCGG TCGCGGAAGC ACCGGCAGAG 
CCCGTACAGG TGGCCCCCGT GGCCCCGGCA GCCCCCGTGA CTCCCGCGCC CGCCAGTGCG 
GACAAGCCCG CCGATGTGCA GGTGGAAGCC GCCCCGGCGG TTGCTGCCCA GCAGGCCGAA 
AAGCCCGCCA CGCCCACCGC GCGCATCATC CGCCCGGCCC GGCCCGACGC TTCGGCCATG 
CCCGACGCCA CCCCCCAGCC CTCCATCCTG CCCCCCGTGG CGGCTGACGC CGCACCGCGC 
GGTGAAGGCG TGGATGGCGA CGAGGACGAC GCCGACGGCA ACCGCCGCAG GAAAAAGAAG 
CGCACGCCCG ACGCGCCCGG ACCCCAGGTC CGCGTCATTT CCCGTCCCGA TCCTTCCGCT 
CCGGCGCCGC GCCCCTACCC GCAAGGCGAC CGCACGGACA GGGGCGACCG CCCCGCCTAC 
GGCGACCGGC AGGGCTACCA GCCCCGCTCC GGCGGCCCCG GCGGCGATCG TCCCAGCTAC 
GGTGGCGACC GGCAGGGCTA TGCGCCCCGC CCCGGCGGCC CTGGTGGCCC CGGCGGTGAC 
CGTCCCGGTT ACGCGCCCCG CCCCGGCGGC CCTGGCGGTG ATCGGCCCGG CTACGCCCCT 
CGTCCCGGCG GGCCCGGTGG TGACCGTCCC GGTTACGGTC CCCGTCCCGG TGGTCCGGGT 
GGTCCCGGCG GCCCCGGTGG TGATCGCCCC GGCGGTTATC GTCCGGGTGG TCCCGGCGGT 
CCCCGTCCCG GTGGCCCCGG CGGCCCCGGC TACGGTCCCC GTCCTGGTGG TCCCGGCGGC 
CCCGGCGGCC CCGGCATGGG CCAGCCCCCG GCGGGCGGCG ACGAAGGCCA GAGCAAGAAG 
AAGCGCCTGA AGGGCCGCCG CACGGTGGAC TTCCAGCCCG GTGCCGATCG CACCACGCGT 
GGCCGCGAGG ACGACGATTT CCCGCGTGGC GGCGCCCGCC GCGGCAAGGG GCGCAAGGGC 
CGCGACATGA AGGTCGCCAC CGCCACCCAG CCGCTGAAGG CAGCCAAGCG CAAGATCAAG 
GTCGAGGAAG CCATCCGCGT GGCCGACATG GCCCACCAGA TGGGCCTGAA GTCCACCGAA 
ATCATCAAGG TGCTGTTCGG CCTTGGTGTC ATGGCGACCA TCAACCAGTC GCTGGACATC 
GAAACCGCCA CCCTGGTGGC CTCGGAATTC GGCTACGAAG TGGAAAAGGT GGGCTTCTCG 
GAAGACGACT ACCTGATCCC AAAGGAAGAA GACACGCCCG AGACCTTGCA ACATCGGCCT 
CCCGTGGTCA CCATCATGGG CCACGTCGAC CATGGCAAGA CCTCGCTGCT CGACGCCATC 
CGCAAGACCA ACGTCACCAT GGGCGAAGCG GGCGGCATCA CCCAGCACAT CGGCGCGTAC 
CACGTGACCA CCAAGAAGGG TGAGATCGTG TTCCTCGACA CGCCCGGCCA CGAAGCGTTC 
ACTGCCATGC GTGCCCGAGG CGCGCAGGTG ACCGACATCG TCGTGCTTGT GGTGGCCGCC 
GACGACGGCG TCATGGAGCA GACCCGCGAA GCGGTGAACC ACTCCAAGGC CGCTGGCGTG 
CCCATCATGG TTGCCGTCAA CAAGATGGAC AAGGAAGGCG CCAACCCGGA ACGCGTGCAG 
CGCGAACTGG CGGAAATGGG CCTGGTGTCC GAAGCCTGGG GCGGCGATAC CGTGTTCAGC 
CATGTGTCGG CCAAGACCCG CCAGGGCCTG GACGAACTGC TGGAACTGCT GGCCCTGCAA 
GCCGAAATCC TTGAGCTGAA GGCCAACCCC GACAAGCCCG CCCGTGGCCA CATCGTGGAG 
GCCAAGCTGG ACAAGGGCCG TGGCCCCGTG GCCACCGTGC TGATCCAGGA AGGCACCCTG 
AAGCAGGGCG ACACCTTTGT GTGCGGCGTG TTCAGTGGCC GCGTGCGCGC CATGTTCAAC 
GACCAGGGCA AGAAGGTGAA GGAAGCCGGC CCCGCCATGC CGGTGGAAGT GCAGGGCTTC 
GAGGGCGTGC CCGAAGCGGG CGAGGAATTC GTGTGCGTGA CGGACGAAAA GCTCGCCCGC 
CGCATCGCGG AAACCCGCGC CGTGAAGCAG CGCGAAAAGG AACTGGCCCG CGAATCCAAG 
GTTACCCTGG AAACGTTCCT GTCCCGTCGC GTCGACGACC AGGAAGCCCT GGTGCTCAAC 
CTTGTCGTCA AGTCCGACGT GCAGGGCTCG CTGGAAGCCA TCTCCGAGGC GCTGCGCAAG 
CTCAGCACCG AAAAGGTGCG CATCAACATC ATCCACGGCG GTGCCGGGGC CATCTCCGAA 
TCCGACATCC TGCTGGCATC GGCCTCCGAC GCCATCATCA TCGGCTTCAA CGTCCGCCCG 
ACCGCCAAGG TCAAGGACAT CGCCGAGCAG GAAAACGTGG ACATCCGCTT CTACGACATC 
ATCTACAAGC TTGTGGATGA AGTGAAGAGC GCCATGGAAG GCATGCTCGC CCCGGTGCAG 
CGCGAAGTGT ACCTGGGCCA GGTGGAAGTG CGGCAGACCT TCGGCGTGCC CAAGGTGGGC 
ACCATTGCGG GCTGCCACGT TGCGGACGGC AAGATCACCC GCAACGCCGG CGTGCGCCTG 
CTGCGCGACG GCGTGGTGGT CTACACCGGC AAGATCACGT CGCTCAAGCG CTTCAAGGAC 
GACATGAAGG AAGTCATGAA GGGCTATGAA TGCGGCGTGG GCCTTGAAAA CTTCAACGAC 
ATCAAGATAG GCGACATCAT CGAAGCCTTC GAGATGGTCG AAGAAGCCGC CACGCTGTAA 

 

Protein sequence

MTDDKTRVKD LSTELGVSTK DLLHTLRDLD IPAKSVMTTL TADEVSRVRE RHQGQTAEAG 
VDRKVVQPGV IVRRRRRDGE EGEAPVRRRA DEGEAASGIA DAEAPAAKAE APVPPAADER 
PARAARAEAP AAPEARPATP AARIIRRHDE PAPVAEAPAE PVQVAPVAPA APVTPAPASA 
DKPADVQVEA APAVAAQQAE KPATPTARII RPARPDASAM PDATPQPSIL PPVAADAAPR 
GEGVDGDEDD ADGNRRRKKK RTPDAPGPQV RVISRPDPSA PAPRPYPQGD RTDRGDRPAY 
GDRQGYQPRS GGPGGDRPSY GGDRQGYAPR PGGPGGPGGD RPGYAPRPGG PGGDRPGYAP 
RPGGPGGDRP GYGPRPGGPG GPGGPGGDRP GGYRPGGPGG PRPGGPGGPG YGPRPGGPGG 
PGGPGMGQPP AGGDEGQSKK KRLKGRRTVD FQPGADRTTR GREDDDFPRG GARRGKGRKG 
RDMKVATATQ PLKAAKRKIK VEEAIRVADM AHQMGLKSTE IIKVLFGLGV MATINQSLDI 
ETATLVASEF GYEVEKVGFS EDDYLIPKEE DTPETLQHRP PVVTIMGHVD HGKTSLLDAI 
RKTNVTMGEA GGITQHIGAY HVTTKKGEIV FLDTPGHEAF TAMRARGAQV TDIVVLVVAA 
DDGVMEQTRE AVNHSKAAGV PIMVAVNKMD KEGANPERVQ RELAEMGLVS EAWGGDTVFS 
HVSAKTRQGL DELLELLALQ AEILELKANP DKPARGHIVE AKLDKGRGPV ATVLIQEGTL 
KQGDTFVCGV FSGRVRAMFN DQGKKVKEAG PAMPVEVQGF EGVPEAGEEF VCVTDEKLAR 
RIAETRAVKQ REKELARESK VTLETFLSRR VDDQEALVLN LVVKSDVQGS LEAISEALRK 
LSTEKVRINI IHGGAGAISE SDILLASASD AIIIGFNVRP TAKVKDIAEQ ENVDIRFYDI 
IYKLVDEVKS AMEGMLAPVQ REVYLGQVEV RQTFGVPKVG TIAGCHVADG KITRNAGVRL 
LRDGVVVYTG KITSLKRFKD DMKEVMKGYE CGVGLENFND IKIGDIIEAF EMVEEAATL