Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DvMF_2483 |
Symbol | |
ID | 7174419 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
Kingdom | Bacteria |
Replicon accession | NC_011769 |
Strand | - |
Start bp | 3130756 |
End bp | 3133971 |
Gene Length | 3216 bp |
Protein Length | 1071 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 643541014 |
Product | multi-sensor hybrid histidine kinase |
Protein accession | YP_002436891 |
Protein GI | 218887570 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 92 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGGCCGC ACATGTTCTC CATCCGTGTC ACCCTGGTCT GGGTCGCCCT TCTGGCGGCC CTGCCCTCGT TCGGGGTCAT CCTGTACGAC TCCCACCGCC TCGCCTCGCA ACTGAAGGTC GAGGCGGAGG CCTCGGTCAC CCGGGCTGCC CGCAGCATCG CCGCCCTGCA GGAACGCGTG GCCGGCGGCG CCCGCCAGAC CCTGACCGTC CTGGCCGCCC TGCCCGACGT GCGCCGACTG GATCCTACCG CCTGCGAAAC GATATTCCGC GAAGTGCTGG CCGGAAACAC CACCCTGCTG AACCTGATGG CCCTCGACGC CAACGGCGAC CTCATCGCCT CGGGCCGCCA GACCATATCC CCCCCGGGTC AGGCTCCCTT CAACCTTGCG GATCGCCTCT ACTTTCGCGC AGCGGTGCGT GACAAGCGCT TTTCCAACGG CGAATACGTG TTGGCGCGCA CCCTGCACGA GTCCACCTTT CACTTCGCGC TGCCGCTGGT GGACGGCGAG GGCCGGGTAT ACGGCGTGCT GGCTGCCCCC TTGCGGCTGG ACCAGTACAA CCCCCTTTTC GACAAGCTGA ACCTGCCCCC CGGCTCGGTC CTGAGCGTGT CCGACCATCG CGGCGTCCGC CTGGCCTACC ACCCGCAGAA CGACGCCAAT CCCGTGGGCA AGCCCATCCG TGAAGAAATA CTGAACATCC TGCGCACCAT GCCCGACGAG GGGCTGTTCA CCCGCGAAAG TTCCGACGGC ACGGTGCGGC TCTACGGGTT CACCCGCATC CGCCTGCACC CGGAATCCGC CCCCTATCTG AATGTAATGG TAGGCATCCC CGAAGATGCC GTGCTGGCCC CGATGCGGGC CGCGCGCAAC CATGCCCTGC TGCTGCTCGG CGGCGCCATG GCAGTTACCC TTGCCGTGGC CTGGAGCATA GGCGGCAGAC TGGTGGCCCG GCCCCTGTCG CACATCGCCG CCACGGCCAC CCGCATCGGC GAGGGGCAGT TGGGCGCACG TACCGGCATC CGCCACGACA TGGGCGAAAT CGGTCAGCTG GCCTTCAGCG TGGACACCAT GGCCGCCATA CTCGCCAGCC GCCAAGGCGA ACGAGAGGCC TTCACTGCAG AACTGCGCGA CAACGAGGCC CGCTACCGCG CCGTGTTCGA CAACGCCATG GACGCCATTC TGCTGGCCGA CGCGGATACC GGCATCATCC TGGACGCCAA CCGGGCGGCC CAGCAGATAT TCGAGTATAC CCGCGACGAA CTGCTGGGCA TGCACCAGCG CCAGTTGCAT CCGGACCGGA CGCACCGCAA CGGCTTCGGC GGGCGGTTCA ACACCCTGCG CGAACAGCCC CTGGAAATTC CCGCGGAAAT GCCCATGCGC ACCCGAACGG GCATCGAACG CGACATGCTG GTCAAGGCCA AGGTACTGCG CGTGGGCAGC CGCGAGGTGG CCGTGGCCAT GCTCCACGAC ATCACCGAGC GCAGACAGTC GGAGCAGCAG TTGCGCGAGG TGGAGGCCCG CTTCCGCTCC ATCGTCGAAG GCGCGCCGCT GGGCCTGCTG CTGCTTACCC TGGACCAGGC CGAGCACCTG CGCATAGAGG CTGTGAATCC CACGGCTGAC ACGGCCCTGC ACATCACCGG GCGGGGCATG CTTGGGCGGC GGGTGACCGA AGCCCTGCCC GGCATCGCCG CCACCAACCT GCCCACCATC TTCGTCGGCA TCGCCCGCAA GGGCGGGGAA TTCAGCGTCA CGGCCCATGC CAGCGCCGGG TGGCTGCCCG CCGGATGGGC CTTTGTGGAC CTGTGGGTGT TCCGCACCGG CAACCGTCAG ATCGCGGTGA TGTTCGCCGA CGTCACCCGG CGCACCCGCG CCGAGGACGA ACTGCGCCAG ACCAGGGATA CGGCGGAAAA GGCCAACCGC TCCAAGTCGG AATTCATCGC GGTGATGAGC CACGAGGTGC GCACCCCCAT CAACGGCATC ATGGGCATGC TGCAACTGCT GCGCGGCAGC CACCTTTCCG GCGAACAGGA AGACTGCGTG GACACGGCAC TGGGCGCCAG CCGCAACCTG CTGCGCATCC TCGACGACAT CCTGGACATC TCGCGCATGG AGGCGGGCGC CCTGCCGCTG GTGGAAGAAC CGTTCACCGT GGCCCAGGTG ACCGAACCCG TGCATGCCAT GCTGACCCCC CAGGCCAAGG CCAAGGGCCT GACCTTCGAG ATGCAGGTCG CCCCGGACCT GCCCCCGGAG CTTGCGGGCG ATGCCGGGCG CATCCGCCAG GTGCTGGTGA ACCTGGTGTC CAACGCGGTC AAGTGCACGG ACACGGGCGG AGTGCGCGTG GAGATGTACC CGCTGCCGCG CTGCGGACAG GCAGGGCGCA CCTGCATTCA CATGGCGGTC ATCGACACGG GCATCGGCTT CGCGCCGGAA CGGCTGCGCA CCCTGTTCGA AAACTACGCC ACGGGCAGCG CGGCCACGGC CCGGCCCGGC GGCACGGGCC TGGGACTGGG CATCGTGCGG CGGCTCGTCC TGCTCATGGG CGGCACCATC TGCGTGGCCA CCACCCCCGG CGAGGGCACG GAATTCCACA TCACCCTGCC CCTGCACACG GAAGCAGAGT TCCCCAAGGA AAGCCGGGCG GCGCGGCGGA CCGCATCGCC AAGCGCATCA CCGGGCACGG CAGGCCCTGC CCCGCACGCC GCCGGGGTCG CGCAGGCAGC CCGTCCCCCA GACGCGGCCC CGCCCCACCC CCAGGCGGCA ACGCCACCGG TGGCGGACGC AGCGGCGGGA AAGGAAGACG CAGCGCCCGG GGCGCCGCCG CGCATCCTGG TGGTGGATGA CGACGAGGTG AACCTGATCA CCGCGCAGCG GCTGCTGACC CGGCTGGGCT ATATCGCAGA CCGCGCCGCC TCCGGGCGGC AGGCCCTGGA AATGCTGGGG CGAGATCACT ACGACGCGGT GCTCATGGAC ATCCAGATGC CCGACATGGA CGGCATGGAG GCAACCCGGC AGATCCGCAT GCGCGAAGCC GTGCTCCCCG GCACCACGCC GCCGTGGGTG CCGGTGCTGG CCCTTACCGC CCATGCCATG CTGGGCGACC GCGAACGCTT TCTGGCGGCG GGCATGAACG ACTACCTGGC CAAACCCATC GAAATCGACC AGTTGGACGC CCGGTTGCGG GCCCACCTGA ACAGCCCACC GCGCAGTCAT GCATAG
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Protein sequence | MRPHMFSIRV TLVWVALLAA LPSFGVILYD SHRLASQLKV EAEASVTRAA RSIAALQERV AGGARQTLTV LAALPDVRRL DPTACETIFR EVLAGNTTLL NLMALDANGD LIASGRQTIS PPGQAPFNLA DRLYFRAAVR DKRFSNGEYV LARTLHESTF HFALPLVDGE GRVYGVLAAP LRLDQYNPLF DKLNLPPGSV LSVSDHRGVR LAYHPQNDAN PVGKPIREEI LNILRTMPDE GLFTRESSDG TVRLYGFTRI RLHPESAPYL NVMVGIPEDA VLAPMRAARN HALLLLGGAM AVTLAVAWSI GGRLVARPLS HIAATATRIG EGQLGARTGI RHDMGEIGQL AFSVDTMAAI LASRQGEREA FTAELRDNEA RYRAVFDNAM DAILLADADT GIILDANRAA QQIFEYTRDE LLGMHQRQLH PDRTHRNGFG GRFNTLREQP LEIPAEMPMR TRTGIERDML VKAKVLRVGS REVAVAMLHD ITERRQSEQQ LREVEARFRS IVEGAPLGLL LLTLDQAEHL RIEAVNPTAD TALHITGRGM LGRRVTEALP GIAATNLPTI FVGIARKGGE FSVTAHASAG WLPAGWAFVD LWVFRTGNRQ IAVMFADVTR RTRAEDELRQ TRDTAEKANR SKSEFIAVMS HEVRTPINGI MGMLQLLRGS HLSGEQEDCV DTALGASRNL LRILDDILDI SRMEAGALPL VEEPFTVAQV TEPVHAMLTP QAKAKGLTFE MQVAPDLPPE LAGDAGRIRQ VLVNLVSNAV KCTDTGGVRV EMYPLPRCGQ AGRTCIHMAV IDTGIGFAPE RLRTLFENYA TGSAATARPG GTGLGLGIVR RLVLLMGGTI CVATTPGEGT EFHITLPLHT EAEFPKESRA ARRTASPSAS PGTAGPAPHA AGVAQAARPP DAAPPHPQAA TPPVADAAAG KEDAAPGAPP RILVVDDDEV NLITAQRLLT RLGYIADRAA SGRQALEMLG RDHYDAVLMD IQMPDMDGME ATRQIRMREA VLPGTTPPWV PVLALTAHAM LGDRERFLAA GMNDYLAKPI EIDQLDARLR AHLNSPPRSH A
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