| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_2442 |
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| Symbol | |
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| ID | 7174376 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011769 |
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| Strand | + |
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| Start bp | 3075945 |
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| End bp | 3076682 |
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| Gene Length | 738 bp |
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| Protein Length | 245 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 643540972 |
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| Product | Lytic transglycosylase catalytic |
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| Protein accession | YP_002436851 |
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| Protein GI | 218887530 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 98 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGAGTCCG GTATCCCGCC CGGCATGCCG GGTGTGACAC AGGGTGCGTA TCCTGCCGAT
GCGCGTGCGG TGCCCGTTGT GGTGCCGCCA GCGGCGGGGG CCATCCTGCA CGGCCCGAAC
GGGGCCATTT CCCGTGCGGA CGGGTTCATT TCCGGTGCGG ATGCGGGTGA TGGCCCGGTG
GACCTTGTGA CCGCGCAACC CGTGCCGCAC CCCGTCGCTT TTCTGCCCCC TGCCGGGCAC
CCCCCTTCGG AAAATTTGCT GGACCGCATG GACGTCTACG CCCTGTCGCC GGATGCGGCC
AAGCTGGCCC TGCCCCGCAT GGTGCCGCTG GTGATGGTGG AGCGGGTGCG CGCAGGCAGG
CTGCCCATGC CCGCCTGGGA CGGAATCATC GCGCGGGCCA GCCGCCTGAG CGGGCTGGAA
GAGCGTCTCA TTGCCGCCGT GGTCCGGGCG GAGTCGGGGT TCAACGTGGG GGCCGTGTCC
CCCAAGGGGG CGCGGGGGCC CATGCAGATC ATGCCCGCCA CCGGACAGGA ACTGGGGCTG
GATGATCCCT TCGATCCGCA GGCCAACGTG GAGGCGGGCA GCCGCTACCT GCGCCAGCAA
CTGGACCGCT TTGGCTCGCT GGAACTGGCC CTTGCCGCGT ACAACGCGGG CCCCGGCAAC
GTGGAACGCT TCGGCGGGGT GCCGCCGTTT GCCGAAACCA GGGCGTTCGT GAACAGGGTG
TTGTCCGGGC TGGATTGA
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| Protein sequence | MESGIPPGMP GVTQGAYPAD ARAVPVVVPP AAGAILHGPN GAISRADGFI SGADAGDGPV
DLVTAQPVPH PVAFLPPAGH PPSENLLDRM DVYALSPDAA KLALPRMVPL VMVERVRAGR
LPMPAWDGII ARASRLSGLE ERLIAAVVRA ESGFNVGAVS PKGARGPMQI MPATGQELGL
DDPFDPQANV EAGSRYLRQQ LDRFGSLELA LAAYNAGPGN VERFGGVPPF AETRAFVNRV
LSGLD
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