| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_2439 |
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| Symbol | |
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| ID | 7174373 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011769 |
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| Strand | + |
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| Start bp | 3074032 |
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| End bp | 3074682 |
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| Gene Length | 651 bp |
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| Protein Length | 216 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 643540969 |
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| Product | type III secretion system protein |
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| Protein accession | YP_002436848 |
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| Protein GI | 218887527 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4790] Type III secretory pathway, component EscR |
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| TIGRFAM ID | [TIGR01102] type III secretion apparatus protein, YscR/HrcR family |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 92 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACCGGCA CCATGCCGCT CTATTACATA GCGGGCATGG CGCTGCTGGG GCTTGCGCCG
TTCTTCCTGA TGATGGTGAC CTCCTACGTG AAGATCGTGG TGGTCACCTC GCTGGTGCGC
AACGCGCTGG GCGTGCAGCA GGTGCCGCCC GCCATGGTCA TGAACGGCCT GGCCATCATC
CTCAGCATCT TCATCATGGC CCCCATGGTG GAAAGCACGC TGGACATCCT GAAGACGGTG
CGGGTGAGCG AACAGCCGGA GCCGCGCGAG GTGGTGGAAC TGCTGGACAG GGCCTCGCCC
CCTCTGCGCG ACTTTCTTTC GCGCAATGCC GACGACAAGG TGATCACCGC GTTCATGGGC
ACGGCCAAGC GCATCTGGCC CAAGGAACGG CACGACACCA TCCGGCGCGA GAACCTGCTC
ATCCTCGTGC CCGCCTTCAC CATTTCGGAG CTGACCAAGG CCTTCCAGAT AGGCTTTCTG
CTGTACCTGC CCTTCGTGGC CATAGACCTG ATCATTTCCA ACATCCTGCT GGCCATGGGC
ATGATGATGG TTTCGCCCAT GACCATTTCG CTGCCCTTCA AGCTGCTGCT GTTCGTCACC
CTGGACGGGT GGCTGAAGAT CAGCCAGGGC CTGCTGCTCA GCTACAAGTA A
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| Protein sequence | MTGTMPLYYI AGMALLGLAP FFLMMVTSYV KIVVVTSLVR NALGVQQVPP AMVMNGLAII
LSIFIMAPMV ESTLDILKTV RVSEQPEPRE VVELLDRASP PLRDFLSRNA DDKVITAFMG
TAKRIWPKER HDTIRRENLL ILVPAFTISE LTKAFQIGFL LYLPFVAIDL IISNILLAMG
MMMVSPMTIS LPFKLLLFVT LDGWLKISQG LLLSYK
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