| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_2415 |
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| Symbol | |
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| ID | 7174349 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011769 |
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| Strand | - |
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| Start bp | 3053406 |
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| End bp | 3055496 |
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| Gene Length | 2091 bp |
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| Protein Length | 696 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 643540945 |
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| Product | type III secretion protein, HrcV family |
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| Protein accession | YP_002436824 |
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| Protein GI | 218887503 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4789] Type III secretory pathway, component EscV |
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| TIGRFAM ID | [TIGR01399] type III secretion protein, HrcV family |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 81 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTGCCC GCGCCAACAC CGCCGTGAAT GCCGTTACCC GGCACAACGA CCTGGCCATC
GTCGCCCTGC TGGTGGTGGT GGTTGCGCTG ATGATCCTGC CGTTGCCCAC CCCGCTGGTG
GACACGCTGA TCGGCGCCAA CATGGCCCTT TCTTTCGTCA TGCTGATGAT GTCCATGTAC
GTGCGCAGCG TGCTGGACTT TTCGGTGTTT CCCACCATGC TGCTGTTCAC CACGCTGTTC
CGCGTGGGGC TGAACATCAC CACCACCCGG CTCATCCTGC TGCAGGCCGA CGCGGGCGAA
ATCATCTTCG TGTTCGGCGA ATACGCGCTT GGCGGCAACT TCGTGGTGGG CGCGGTGGTC
TTCGTCATCC TGACCATCGT GCAGTTCCTG GTCATCGCCA AGGGCGCCGA GCGCGTGGCC
GAAGTGGGCG CGCGCTTCAC CCTGGACGCC ATGCCCGGCA AGCAGATGTC CATCGACGCG
GACATGCGCG CGGGCGTCAT CGACATGGAG GAAGCCCAGC GCCGCCGCAA CATGGTGTCG
CAGGAAAGCC AGATGTACGG CGCCATGGAC GGCGCCATGA AGTTCGTCAA GGGCGACAGC
ATCGCCGGCA TGATCGTGGC CGTGGTCAAC ATCGTGGGCG GCACGGTCAT CGGCATCACC
CAGCATGGCA TGACCGGGGC CGACGCCCTG CACACCTACG GCATCCTGAC CATCGGCGAC
GGCCTGGTCT CGCAGATACC CTCGCTGCTG GTGTCCATTT CGGCGGGCAT CCTGATCACC
CGCACGGGCG ATTCGGGCGG CAACGTGGGG GCGCAGATCG GCGGTCAGAT CTTCGGCCAG
CCAAAGGCGC TGCTGATGGC GGGCGGGCTG GTGTTCCTGT TCGCGCTGGT GCCGGGCTTT
CCCAAGCCGC AGCTGTTCGG GCTGGCCCTT GCCATCGGCG GGTTCGGCTA CGTGCTGCAA
CGCATGGCCG AGGCCCCCGT GGCCGCCGAC CCCAGGGCGG AACTGAGCCG TTCGCTGGCC
CCGGCCGCAC GACCCCGCAC GCCGCGCCCC GGCGCGGCGC AGCCCGGCGA CGATTTCGCC
CCCACCGTGC CCATCATCCT GGACCTTTCG GCGGAACTGG GCGAGGCCCT GCACTACGAT
GCCCTGAACG AGGAGCTGAT CAACCTGCGC CGGGCGTTGT ACTTCGACCT CGGCGTGCCG
TTCCCGGGCA TCAACATCCG GCCCAGTCCC GGTCTGGAAG GGCTTTCCTA CGTACTGAAC
CTGAACGAAA TCCCCATGTC GCGCGGCACG CTGGAACGAG GCATGTCCCT GGCCCGCGAC
ACCAGCGAAA ACCTGGCCAT GCTGGGCGTC AACGCAAGGA CGGGCGAACG CTTCCTGCCC
GACGTGGACC CCCTGTGGGT GCCCGACGAG CAGCTGCACC TGCTGGACAA GGCGGGCATA
GGGCACATGA GCCACGCGCG CATCCTGGCC TACCACCTGT CGCTGGTGCT TTCGCGCCAC
GCCAGCAACT TCCTGGGCAT GCAGGAGGCC AAGTACCTGC TCGACCGCAT GGAAGAACGC
GCGCCCGACC TGGTGCGCGA GGCAACGCGC CTGCTGCCGG TGCAGCGCAT CGCGGAAATC
TTCCAGCGCC TGGTGCAGGA ACAGATTTCC ATCCGCGACC TGCGCAACAT CCTGGAAGCG
CTCATCGAAT GGAGCCCCAA GGAAAAGGAC ACGGTCATGC TGACCGAGTA CGTCCGCGGC
GCGCTGAAGC GGCAGATAAG CTACATGCAT TCGCGCGGGC AGAACATGCT GCCCGCCATC
CTGCTGGACC CGCAGGTGGA GGAAACCATC CGCAAGGCCA TCCGCCAGAC CTCGGCGGGG
GCGTTCCTGG CGCTGGAGCC TTCGGTGACC GAGCGGTTCA TGAAGGCCGT GGGCGATGCC
GCCGGGCGCT ACGCAAGCCA CGCCCAGAAA CCGGTGATCA TGACCTCCAT GGACATCCGG
CGCTACGTGC GCAGGCTGAT AGAGGGCGAC CACTACGGGC TGGCGGTGAT CTCGTACCAG
GAACTGACGC CCGAAATATC GGTGCAGCCG GTCAACCGCA TCCGGCTGTA G
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| Protein sequence | MLARANTAVN AVTRHNDLAI VALLVVVVAL MILPLPTPLV DTLIGANMAL SFVMLMMSMY
VRSVLDFSVF PTMLLFTTLF RVGLNITTTR LILLQADAGE IIFVFGEYAL GGNFVVGAVV
FVILTIVQFL VIAKGAERVA EVGARFTLDA MPGKQMSIDA DMRAGVIDME EAQRRRNMVS
QESQMYGAMD GAMKFVKGDS IAGMIVAVVN IVGGTVIGIT QHGMTGADAL HTYGILTIGD
GLVSQIPSLL VSISAGILIT RTGDSGGNVG AQIGGQIFGQ PKALLMAGGL VFLFALVPGF
PKPQLFGLAL AIGGFGYVLQ RMAEAPVAAD PRAELSRSLA PAARPRTPRP GAAQPGDDFA
PTVPIILDLS AELGEALHYD ALNEELINLR RALYFDLGVP FPGINIRPSP GLEGLSYVLN
LNEIPMSRGT LERGMSLARD TSENLAMLGV NARTGERFLP DVDPLWVPDE QLHLLDKAGI
GHMSHARILA YHLSLVLSRH ASNFLGMQEA KYLLDRMEER APDLVREATR LLPVQRIAEI
FQRLVQEQIS IRDLRNILEA LIEWSPKEKD TVMLTEYVRG ALKRQISYMH SRGQNMLPAI
LLDPQVEETI RKAIRQTSAG AFLALEPSVT ERFMKAVGDA AGRYASHAQK PVIMTSMDIR
RYVRRLIEGD HYGLAVISYQ ELTPEISVQP VNRIRL
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