Gene DvMF_2410 details

Gene Information

• Locus tag: DvMF_2410
• ID: 7174344
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Desulfovibrio vulgaris str. 'Miyazaki F'
• Kingdom: Bacteria
• Replicon accession: NC_011769
• Strand: -
• Start bp: 3047840
• End bp: 3049822
• Gene Length: 1983 bp
• Protein Length: 660 aa
• Translation table: 11
• GC content: 69%
• IMG OID: 643540940
• Product: protein serine/threonine phosphatase
• Protein accession: YP_002436819
• Protein GI: 218887498
• COG category: [K] Transcription; [T] Signal transduction mechanisms
• COG ID: [COG2208] Serine phosphatase RsbU, regulator of sigma subunit

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 86
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGACCTTCT CCCTGCGCTC CAAACTGTTC ATCCTGGTGC TTGCCTCCAT CGCCCTGGCG 
GTGGTGCCGG TCATCTCCTT CACCTACCGC GACCTGCGCG AATCCAACGC CGAACTGGAA 
CGAGAGGCGT TCGGCAACGT CATCGTGCTG ATGGAGGACA ACATCGGGTC GCGCTACCTC 
GGCCACCTCA CCAACAAGGT GATGGACGTG CTGCTGCGCA AGGACCAGTT GCGCCGCTAC 
TCGCAGCTGG CCCGGTCCGC GTGGCAGGAC GTGTCCGCCT TGCCGGGCGA CGCCCGCCAG 
CGGTTCATCG CCAACTGGAT AGAGCGGCTG GGCAGCTTTG GCGTGCACAT GGACATCTTC 
GACGCGCACG GCGCCCCCCG CGCGGGCACC CCGCAGCTGG CCCTGCTGTC CGCCCGCCCT 
GGCATGACCG ACTTCAAGGG GCGGCCCGTG GGGTCGCTGC TTTCGCTGGC GCAGCTTTCG 
CCCGAGGGCG AATTCGCCGT GTTCGACACC CTGCCCGGCT CCCCCGGCAC GGGCAGTGCG 
TCGGAGCCGC TGCTGGTCTA CTTCCTGCCC ATGCCTGAAA CGGACAGCGT GGTGGTTTCC 
GCCATGCTGC TGTCCGACAT CGAGCGGCAG GCCCTGTACA ACGAGCAGCA GATCATCCGC 
AGCACCCAGG AAAAATTCCA GACCCTGTCC CTGGGCAAGA GCGGGTTCAT CGCCCTGGTT 
TCCGGCAAGG GCGAACTGCT GGCCCACCAC GGCAACCCCA AGGGGCGCGA GGTTGCGCTC 
ATTCCGCCGC GCGCCCTTGC GGAAGCCAGG GAAAAGGGCC GGACGGAAAC CATCGCGGAC 
ACCGGCCCGG CCTTTGGCGT GGCCATCTTT CGCGCAGCCT ACTTCAAGGC CCTGGACTGG 
TACGTGGTGT CCGCCGCGCC GCAGGCCGAA ATAGAGGCCC CCACCAATGC GCTGGTGCGC 
AAGCTGGCCT TCATCGCGCT GGCCGCCGTG CTGATCAGCG CGGCGGGCAC CCTGCTGCTT 
ACCGCGCGAT TCATCGCCCC GTTGCGCGCC CTGACGGGCC GCGCCCATGC CCTTGCCGAG 
ACGGACTTTT CCGCGCCCGA CGCGGAAACC CTGACAGCAA ACGGCCTGCC CACGTCGCGT 
TCCGACGAGG TGGGGCAGCT GGCCCGCGCC TTCACCCAGA TGGGCCGGGC GCTGGCCCGC 
AACGTGCGGG CGCTGATGGA CACCACTGCG GTCAAGGAAC GCATGCAGGG CGAGCTGAAC 
GCCGCGCGCG ACATCCAGAT GGGCATCCTG CCCGCGCCCG GCGCCGCGCC CAAGCAGGCG 
GGCTACGCCG CCTCGGCCCT GCTGGAACCG GCCAAGGAGG TGGGCGGCGA CCTGTACGAC 
TTCTTCGTCG CGCCCGACGG CAGGCAGGTG GTGGTCATCG GCGACGTGTC GGGCAAGGGC 
GTGCCCGCCG CGCTGTTCAT GTCCATGGCC GTAACCCTGT GCCGGTACGC CGTGGCCTCG 
GGCCTCGCGC CCGGCGCGGC CATGACCCGC ATCAACGCCC AGCTTGCCGC CAACAACCCC 
GGCTGCATGT TCGTCACCCT GCTCATCGGG CTGTTCGACC CGGCAACGGG CACGCTGGAG 
TTCGCCAACG GCGGGCATTG CCCCCCCTGC GTCACCGGGC CGGGCGCCGA GGCCCCGCGC 
GAACTGCCGG GCATCAGCGG CCCGCTGGTG GGGGCCATGG AAGACGTGGA GTACGAAACC 
CTGCACGCGG TCATCGCGCC GGGCGAACGC TGCCTGCTGT ACACCGACGG GGTGACCGAG 
GCCATGAACG AAAGGCTGGA GCTGTTCGAC CTGCCGCGGC TGATGGACGT GCTGCACGCC 
CACCGCGAGG ATACGCCCGC CGGTATCCTG CGGGCGCTGC ACGAGGCCAC GGTGGCCTTC 
CGGGGCACGG CGGAGCAGTC CGACGACATC ACCATGCTCT GCTTCACGCG CGAAGCGGCC 
TGA 

 

Protein sequence

MTFSLRSKLF ILVLASIALA VVPVISFTYR DLRESNAELE REAFGNVIVL MEDNIGSRYL 
GHLTNKVMDV LLRKDQLRRY SQLARSAWQD VSALPGDARQ RFIANWIERL GSFGVHMDIF 
DAHGAPRAGT PQLALLSARP GMTDFKGRPV GSLLSLAQLS PEGEFAVFDT LPGSPGTGSA 
SEPLLVYFLP MPETDSVVVS AMLLSDIERQ ALYNEQQIIR STQEKFQTLS LGKSGFIALV 
SGKGELLAHH GNPKGREVAL IPPRALAEAR EKGRTETIAD TGPAFGVAIF RAAYFKALDW 
YVVSAAPQAE IEAPTNALVR KLAFIALAAV LISAAGTLLL TARFIAPLRA LTGRAHALAE 
TDFSAPDAET LTANGLPTSR SDEVGQLARA FTQMGRALAR NVRALMDTTA VKERMQGELN 
AARDIQMGIL PAPGAAPKQA GYAASALLEP AKEVGGDLYD FFVAPDGRQV VVIGDVSGKG 
VPAALFMSMA VTLCRYAVAS GLAPGAAMTR INAQLAANNP GCMFVTLLIG LFDPATGTLE 
FANGGHCPPC VTGPGAEAPR ELPGISGPLV GAMEDVEYET LHAVIAPGER CLLYTDGVTE 
AMNERLELFD LPRLMDVLHA HREDTPAGIL RALHEATVAF RGTAEQSDDI TMLCFTREAA