Gene DvMF_2360 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvMF_2360 
Symbol 
ID7174294 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris str. 'Miyazaki F' 
KingdomBacteria 
Replicon accessionNC_011769 
Strand
Start bp2980896 
End bp2982236 
Gene Length1341 bp 
Protein Length446 aa 
Translation table11 
GC content67% 
IMG OID643540890 
ProductTol-Pal system beta propeller repeat protein TolB 
Protein accessionYP_002436769 
Protein GI218887448 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0823] Periplasmic component of the Tol biopolymer transport system 
TIGRFAM ID[TIGR02800] tol-pal system beta propeller repeat protein TolB 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones71 
Fosmid unclonability p-value0.28939 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGACAGC ATCATGCCAT CCACCGCCTT ATGGCGGCAG TGTGCCTCAT CGCGTGCTGC 
GCGCTGGCGG CCCCGGCCCT TGCGGTCGGC CCCGTGCAGA TCGACATCTA CGGCCCCGGC
CAGGGCAGCC TGAACCTTGC CCTTGCCGAT CCGCTGGGCC CCACCCCCGG CACCCCGGTG
ACCGGGCAGG GCGTGAAGCT GAACGAAATC ATCCGCGAGA ACCTGAGCTT TCTGCCGTTC
CTGCGCCTGA CCGACCCCAA GGCCATCCTG GGCGGTTCGG TGCTGCAAAG CTACAAGGCT
CCGGACATCG ACTTCAAGCG CTTCCAGATC GCGGGCACCG ACCTTGTGGT CACCGCGGGC
TGGCCCCAGG GCGACGCCCC CGGCAAGCCC TTCGTCGAAC TGCGCGTGTA CGAGGCGTAT
TCCGGCAAGC TGGTGTTCGG CAAAGGCTAC TACGACATCC AGGAAACCCA GCTGCCCGAC
GTGGCCGACC GCTTCTGCTC CGACCTCATG AAGGCCCTGA CGGGCCGGGG CGAGTTCTTC
AAGTCCACCC TGGCCTTCGT GAAATCGGGC GGCAAGAACA AGAAGGACGT GTGGCTCAGC
AAGCCCACCG GCCGCGACCT GCGCCAGATC ACCAACCTGC CCGGCGAGGC CATGTCCCCG
TCGTGGTCGC CCGACGCGCG ATTCATCGTG TTCAGCCACA TGGACGACCG CACCCACGCC
CTTGGCGTGT GGGACCGCCT GACCCGCCAG ACCCAGCGCA TCAAGTTTCC GGGCAACACC
GTCATCGGCC CCACCTTCAT GCCCGACAAC AAGGTGGCGG TCAGCCTTTC CACCGGCAAG
AACCCCGGCA TCTTCCTGCT GAGCCACGTG TTCCAGAAGG AACGCGCGCT TGAGGACAGC
GCCTCCATCG ACGTTTCGCC CTCGTTCGAC GCCACCGGCA CCAAGATGGC CTTCTGCTCC
AGCCGCCTGG GCGGTCCGCA GATCTTCCTG AAGGACCTGA CCACCGGCCA GGTGACGCGC
ATCAGCCGCA GCGGCAACTA CAACACCGCC CCGTCCATCA GCCCCGACGG CACGCTGATC
GCCTTTGCCC GCATGACCGA CTTTGGCCAC CGCATCTTCG TGTACGACAT GGTCACGCAG
TCGGAGCGGC AGGTAACCTT CGGCCCCGGC ACCGACGAAA CCCCGTCCTT CGCGCCCGAC
AGCTACTTTC TGGCGTTCAC CTCCACCCGC AGCGGCGCCA AGCAGATCTA CCTGATCACC
CGGCACGGCG GCGACGCCAA GCGGGTGCCC ACGGGCGCCG GTGACGCCTC GTTCCCGGAC
TGGGGCATGA TCCCCGACTA G
 
Protein sequence
MRQHHAIHRL MAAVCLIACC ALAAPALAVG PVQIDIYGPG QGSLNLALAD PLGPTPGTPV 
TGQGVKLNEI IRENLSFLPF LRLTDPKAIL GGSVLQSYKA PDIDFKRFQI AGTDLVVTAG
WPQGDAPGKP FVELRVYEAY SGKLVFGKGY YDIQETQLPD VADRFCSDLM KALTGRGEFF
KSTLAFVKSG GKNKKDVWLS KPTGRDLRQI TNLPGEAMSP SWSPDARFIV FSHMDDRTHA
LGVWDRLTRQ TQRIKFPGNT VIGPTFMPDN KVAVSLSTGK NPGIFLLSHV FQKERALEDS
ASIDVSPSFD ATGTKMAFCS SRLGGPQIFL KDLTTGQVTR ISRSGNYNTA PSISPDGTLI
AFARMTDFGH RIFVYDMVTQ SERQVTFGPG TDETPSFAPD SYFLAFTSTR SGAKQIYLIT
RHGGDAKRVP TGAGDASFPD WGMIPD