| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_2357 |
|---|
| Symbol | |
|---|
| ID | 7174291 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011769 |
|---|
| Strand | + |
|---|
| Start bp | 2976231 |
|---|
| End bp | 2977883 |
|---|
| Gene Length | 1653 bp |
|---|
| Protein Length | 550 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 643540887 |
|---|
| Product | AMP-binding domain protein |
|---|
| Protein accession | YP_002436766 |
|---|
| Protein GI | 218887445 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 69 |
|---|
| Fosmid unclonability p-value | 0.210215 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACGAAT TCGCAGTGCG CGAACGGACC CTTGGCCAGA TACTGGACGA GACCGTCGCC
AAATATCCGG ACAACGACGC GGTCATCTAC GTGGACCGCG ACTACAGGCA GACCTACCGG
CAGTTCTCGC AGGTGGTGGA CGACCTGGCC AAGGGGCTGA TGGCCCTTGG CGTGCGGCAT
GGCGAAAAGG TGGCCGTGTG GGCCACCAAC GTGCCCTACT GGGTGGCGTT GCAGTTCGCC
ACGGCCAAGA TGGGCGCCAT CCTGCTCACG GTGAACACCA ACTACCGCGA GCATGAAATA
CGCTACCTGC TCACCCAGTC GGAGTGCGAG AACCTGTTCA TCATCGACGG GTTCCGCGAC
CACGACTACG TGCAGACCAT CTACAACATG ATCCCGGAAC TGAAGACGCA GCCGCGCGGG
CAGTTGCGCT GTTCCTCGCT GCCGCACCTG AAGCGGGTCA TGTTCCTGGG CGCGGAAAAG
CACCGCGGCA TGTATTCCGT GCCGGAGATC ATCAGCATGT CGGCCATGGT CTCGGACGAG
GAATACGCCG AGCGCCAGCG CGCGCTGGAC CCGCACGACG TGGTGAACAT GCAGTACACC
TCGGGCACCA CCGGGTTTCC CAAGGGGGTC ATGCTCACCC ACGTGAACAT CGGCAACAAC
GGGTACTGGA TCGGCAAGAA CCAGCACTTC ACCGAAAAGG ACCGCGTGTG CCTGCCGGTG
CCGCTGTTCC ACTGCTTCGG CTGCGTGCTG GGGGTGCTGG CCGCCATCAA CCACGGGGCC
GCGCTGGTGA TCCTGGAGAG CTTCAGCCCC ATGCACGTCA TGGCATCCGT GGACCAGGAA
AAGTGCACCG CCCTGTACGG GGTGCCCACC ATGTTCCTGG CCGTGCTGGA GCACAAGCTG
TTCGAGCGCT TCGACTTCAG TTCGCTGCGC ACCGGCATCA TGGCCGGTTC CGTCTGCCCG
GAACCCCTGA TGCGCCGGGT GGTCGAAAAG ATGTACATGC GCGAGATCAC CATCTGCTAC
GGCCTGACCG AAGGTTCGCC GGTGATGACC CAGAGCCTCG TCACCGACCC CTTCGAACGT
CGCGTGCAGA CCGTGGGCCG GGCCATGCCG TGCATCGAGG TGCGCATCGT GGACCCGGAT
ACCAACGAGG AAGTGCCGCG CGGCACCCAG GGCGAGGTGG TCTGCCGGGG CTACAACGTG
ATGAAGGGCT ACTACAACAT GCCCGAAGCC ACGACTGCCG CCATCGACGC CGATGGCTGG
CTGCATTCCG GCGACCTTGG CGTCATGGAC GAGGAAGGCT ACGTGGTCAT CACCGGTCGC
ATCAAGGACA TGATCATCCG GGGCGGCGAG AACATCTACC CCCGCGAGAT CGAGGAGTTC
CTGTACGGCA TGGACGGCGT GCAGGACGTG CAGGTGGTGG GCGTGAACAG CCGCAAGTAC
GGCGAGGAAG TGGGGGCGTT CATCATTCCC AAGCCCGGGG TTGAGATGGC GCCGGAAGAT
GTGCGCGACT ACTGCCGTGG CCGCATCGCC TGGCACAAGG TGCCGCGCTA CATCAGCTTC
ATCGATGCCT ATCCCATGAC CGCCAGCGGC AAGATCCAGA AGTTCAAGCT GCGCGAGATG
GCGGCGGAAC TGTTTCCCGA GGCCATGAAA TAG
|
|---|
| Protein sequence | MDEFAVRERT LGQILDETVA KYPDNDAVIY VDRDYRQTYR QFSQVVDDLA KGLMALGVRH
GEKVAVWATN VPYWVALQFA TAKMGAILLT VNTNYREHEI RYLLTQSECE NLFIIDGFRD
HDYVQTIYNM IPELKTQPRG QLRCSSLPHL KRVMFLGAEK HRGMYSVPEI ISMSAMVSDE
EYAERQRALD PHDVVNMQYT SGTTGFPKGV MLTHVNIGNN GYWIGKNQHF TEKDRVCLPV
PLFHCFGCVL GVLAAINHGA ALVILESFSP MHVMASVDQE KCTALYGVPT MFLAVLEHKL
FERFDFSSLR TGIMAGSVCP EPLMRRVVEK MYMREITICY GLTEGSPVMT QSLVTDPFER
RVQTVGRAMP CIEVRIVDPD TNEEVPRGTQ GEVVCRGYNV MKGYYNMPEA TTAAIDADGW
LHSGDLGVMD EEGYVVITGR IKDMIIRGGE NIYPREIEEF LYGMDGVQDV QVVGVNSRKY
GEEVGAFIIP KPGVEMAPED VRDYCRGRIA WHKVPRYISF IDAYPMTASG KIQKFKLREM
AAELFPEAMK
|
|---|
| |