| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_2340 |
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| Symbol | |
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| ID | 7174274 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011769 |
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| Strand | - |
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| Start bp | 2949515 |
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| End bp | 2952328 |
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| Gene Length | 2814 bp |
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| Protein Length | 937 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 643540870 |
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| Product | Sigma 54 interacting domain protein |
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| Protein accession | YP_002436749 |
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| Protein GI | 218887428 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 83 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCTACT ACAGGCCGCC GCTGTTCGGC ACGCTGTTCC GACTGGAAGG CAATTTCTCG
GAATGGAGCA TCGCCAAACG GCTGCTCTTC GCGGCGCTGC CCGCGTTCAT GCTGCTGCTG
ATCATCAGCG GAATGATCTC CCACCGCATT TCCCAGAACT TCCTACACGA CGCGCTGGGG
CGCAGCTCGC TGCTGGCCAC CCTGTCACAG GCCCACGAGA TGGAGCAGGT GCTCCAGCAG
GCCCGGCGCG AACTGCTCTA CCTTGCCCGC ACCGACATTT CCTCCGCCTC GCTGGCCCAC
CACCTGCGCA CCCGCGCCGA GACCATGGGC ACCCTGTACC GCGAAATCGC CTATCAGGGC
TCCACGCCGG ACAACCGCCT GTTGTTGCTG AACACCGGTC GCGACGTATG GATGGTGCCG
CTGGAGCAGG CCCTGGCCAC CCGTTTCGGC CCGCTGACCC GCCAGAACAC GCAGGAGCCC
AAGCCCGGCT TCGTGCGCAT TTCCGCCCCC ACCGAAGTGG TCTACCCCTC CGTGCCCACG
GCGGGCACCG TGCAGGGGTT GTCCATGCAC GTGCTGCGGC TGACCACGCC CGTACTGGAC
GCCGCAGGCA ACCAGACCGG GCTGCTGACC CTGTCGGTGG ACATGCTGGC CCTGCGCAAC
GTGCTGTCGG TCTACGCATC GCGCCGGTCG CCGCTGTACA TCTTTCCGGA AGAAACGGAA
AAGCACCGCA GCTTCTTCTT CGACTCCCAC GGATGGATCC TGTTCCAGTC GGAATCGCCG
GAACATCCCA ACCTGGAGCT GTCCACCGAT ACGGTGCGTT CGGGCATGCG CGGCGACTTC
GGACGCCCCG GCTTCGAGGC GGCCTTCCGT CCCAATCCGG AGCAGGAGCG ATACTGGGGC
ATGGTCACAG AGGTGCAGTC CGGCAATTCC GGCCAGAGCC GCCTGGGCAC CATGCTGGAA
GACCCCTCGC CCATGAACCG GGCCTTCTAC ATCAGCTACG CGCCGGTCAC CTTCAGCGAA
GGCCCCGGCG CCAGCACCGT GGTGGTGGGC GGCATCGCCT ACACCGACAC CAGCTTCCTG
GCCATGGCCG CGTCCTACAA GCTGTATGGC GCGCTGTTCG TGTTCGGGTT GTGCGCCAGC
GCGGTGGCCG CCTTCATTCT GGCCATGCTG GGACGCGGCA TCGCCGGGCC GCTGCACCGC
ATTGCAGAGG AAGCCAGCGG CAAACTGGAA TCGGGCGACC TTACTCCCAT CCATCTGGAA
CGGGTGCACC CTGAAGCGGA GGCCCTGCTC CAGACCACCA ACGAAATGTT GGCCGCCCTG
CAAGCGCGCA ATGAAGAATT GCGCCTGCGC GAAGAACACA TCCAGTCCAC CCGGCGACGG
CAGCGGGTAT GCCTGGACAC GGAAATCGCG CAACAGCAGC CGCAAAGCCA GCTTTCGCCA
CAGGACACCA TGCCCGGCAT CGTGGGCACC AGCGAATCGG TGCGCGGCCT GCGCGGCATG
ATCCGCAAGG CCGCCGGCGT CGAGGCCGAC GTGCTTATCA TCGGTGAAAC GGGCACAGGC
AAGGAACTGG CCGCCGAGGC CATCCACATG ACCAGCGACA GGGTGGGCGG GCCGTTCATC
TCCATCAACT GCGGCGCCCT GGACGAAAAC CTGCTGCTGG ATGCGCTGTT CGGCCACGTG
AAGGGGGCCT TTTCCGAGGC GCGGGGCGAG CGCAAGGGGG CCTTCGTGGC CGCCGACGGC
GGCACGCTGC ACCTCGATGA AATCGGCAAC GCCTCGCCCA AGGTGCAGCA GGCCCTGCTG
CGCGCCCTGT CGGTGAGGCG CATCCGCCCC CTGGGCAGCG ACGACGAAGT GCCCTTCGAT
GCGCGCATCA TCGCCGCCAC CAACGTGGAC CTGAAGGAAT GCGCCCGGCA GGGCACCTTC
CGGGAAGACC TGTACTACCG GCTGGCGGTG ATCACCATCA ACACGCCCCC CTTGCGCGAT
CGGCGAGAGG ACATCCCCGC CCTGGCCGAC TACTTCCTGA AGCAGGCCGC GCACACCCTG
AAGCGCCCGG CCATGGGCCT TTCGCGCGGG GCGCTGGAAA AGCTGCTGGC CTACGGCTGG
CCGGGCAACG TGCGCGAAGT GAAGAACTGC ATCACCCGCG CCGTGGCCTT TGCCGAAGGG
GACACCCTGT ACGCCGAAGA CCTGCGCTTT GGCGCTGAAC TGGACCCCAC CCTGTCGCAC
GGGGCGCTGC TGCCGCCAAG TCCGGCCCCG TCGCACGCGG GCCAGCCCCC CTACCCGCAG
GCCCAACAAC CCGCCGCGCC CTACCCCGGC GACGGCACCG CGTACGGCGT CCCGTACGGA
GCCCAGCCAC CGCAAGGCAT GCCCGGGGGC CCCGCAGGCG CGCCCGTGCA CGCACAGTCG
GGCGCCACCA TGTACGATCC GGTCAGTGGT CGCATCGTGT CCAGCGGCAC CGGCACCGGC
GGGCCGGACT GGTCGGACGC CGGGGCCATG CACGGCACAC GGGCAAGGAA TGATCGCGCG
GGCGGCACCT CCGGCAACGG ACGCCAGCCA CACAACGGGC AGGATGGCGC GGGCGCACCG
CAGCTTTCCG CACTGAACCC GCGCCAGCGG GCAGCCTGGG AATTCATCAG CCGCAACGGC
GGCATCACCC GCACCCAGTA TCAGGACATA GTGGGCAACG AGATACCCGT GCGCACCGCG
CAGTACGACC TGCAGGACAT GGTGCGCAAG GGCTTCATCC GCAAGGTGGG CAAGGGGCCC
GCCACCCGGT ACGTGCTGAC GGAAGGCGGC GTGCCGGTAC CGCCACGGAG GTAA
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| Protein sequence | MRYYRPPLFG TLFRLEGNFS EWSIAKRLLF AALPAFMLLL IISGMISHRI SQNFLHDALG
RSSLLATLSQ AHEMEQVLQQ ARRELLYLAR TDISSASLAH HLRTRAETMG TLYREIAYQG
STPDNRLLLL NTGRDVWMVP LEQALATRFG PLTRQNTQEP KPGFVRISAP TEVVYPSVPT
AGTVQGLSMH VLRLTTPVLD AAGNQTGLLT LSVDMLALRN VLSVYASRRS PLYIFPEETE
KHRSFFFDSH GWILFQSESP EHPNLELSTD TVRSGMRGDF GRPGFEAAFR PNPEQERYWG
MVTEVQSGNS GQSRLGTMLE DPSPMNRAFY ISYAPVTFSE GPGASTVVVG GIAYTDTSFL
AMAASYKLYG ALFVFGLCAS AVAAFILAML GRGIAGPLHR IAEEASGKLE SGDLTPIHLE
RVHPEAEALL QTTNEMLAAL QARNEELRLR EEHIQSTRRR QRVCLDTEIA QQQPQSQLSP
QDTMPGIVGT SESVRGLRGM IRKAAGVEAD VLIIGETGTG KELAAEAIHM TSDRVGGPFI
SINCGALDEN LLLDALFGHV KGAFSEARGE RKGAFVAADG GTLHLDEIGN ASPKVQQALL
RALSVRRIRP LGSDDEVPFD ARIIAATNVD LKECARQGTF REDLYYRLAV ITINTPPLRD
RREDIPALAD YFLKQAAHTL KRPAMGLSRG ALEKLLAYGW PGNVREVKNC ITRAVAFAEG
DTLYAEDLRF GAELDPTLSH GALLPPSPAP SHAGQPPYPQ AQQPAAPYPG DGTAYGVPYG
AQPPQGMPGG PAGAPVHAQS GATMYDPVSG RIVSSGTGTG GPDWSDAGAM HGTRARNDRA
GGTSGNGRQP HNGQDGAGAP QLSALNPRQR AAWEFISRNG GITRTQYQDI VGNEIPVRTA
QYDLQDMVRK GFIRKVGKGP ATRYVLTEGG VPVPPRR
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