| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_2324 |
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| Symbol | |
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| ID | 7174258 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011769 |
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| Strand | - |
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| Start bp | 2926030 |
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| End bp | 2929518 |
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| Gene Length | 3489 bp |
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| Protein Length | 1162 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 643540854 |
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| Product | PAS/PAC sensor hybrid histidine kinase |
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| Protein accession | YP_002436733 |
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| Protein GI | 218887412 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase
[COG0784] FOG: CheY-like receiver |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 90 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCAGAC GCCCCGCCAT CTCGCAGAGC CGCAACATCG CCATCGCCGG TGGCATCATG
GCGCTGGTCT GCTCGGGCAT CCTGCTGCTG TGGGTGAATC ACGGCTGGCA CGCCAGCCTG
CGCGGTTTCC TGCCGGTGGT GAAGGCGCTG CGCATCGCCA GGGCCGACCT GCTGAAGGGC
CAGTTGGCCG CCGAGCGCCA GTTGGCGGGC GATGCCGACA TTCCCCCCGG CATCCACGGC
GCCTACTTCG AACAGGGGGC AGGCAGGCTG TACGATGCCG TGGACGAACT GCTGGACCCC
GGCGACAGCG CCCTGCCCGC CCTTTCGGCC CTCCGGCCCT TTCAGGAGGA CGCCCCGGAA
ATGCTGGTGG CCCAGTTGCG CATCTACGCA GACGGCATCA GCGCCCTCAA CCGCACCACC
AACGCCCGGC TCGCGGCCCC GCGCGCGGAA CATCCCCTGC TGGTGCTGGA ACAGCGCCGC
GCCTTCACCG AACTGGACCG GCTGGGCGAT GCGCTGGAGC GCAGCGTGTT CTCCCGTTTC
GTGGAGGACG CCGAGCGCCA GAGCCGCCTG ACCCGCGTGG TCTTCGTGTT GTGGATGGTC
TTTCTGTGCG GGCTTACCCT GCTGTTCAAG GTCGCCGCCG ACCGCCGCCG CGCCGCCGAA
ATGGCCCTGG TGGACAGCGA AGAGCGCTGG CAGTTCGCCC TGGAGGGCCC CGGAGACGGC
GTGTGGGACT GGAACATCCG CTCCGGCCAG GTGTTCCTGT CCCCCCGCTG GAAGGGGCTG
CTGGGCTACG AAGAGAACGA GATAGGCACC TCGCCCAGCG AATGGGAAGG TCGCGTCCAC
CCCGACGACA GGCAGCGGGT GCAGGCCGAC ATGGACATGC ATCTTTCCGG CGCCACCGAC
ACCTACCAAT CGGAATACCG CATGCGGCGC AAGGACGGCG CATACATCTG GGTGCTGGCC
CGCGGCAGGG TGATGTCCCT GGCGGAAGAC GGCACGCCGC TGCGCTTCGT GGGCACCCAT
TCGGACATCA CCGCCCGCCG CCAAGCCGAG GAAGCCCTGC GCGCCAGCCG CGAAAACCTG
GCCGTCACCC TGCGTTCCAT CGGCGATGCG GTGATGGCCA CCGACCGGGC CGGACGTATC
ACCCTGATGA ACCCGGTGGC CGAACGGCTG ACCGGCTGGC CCTTTGCCGC GGCCAAAGGG
CGGCACATCG GCGAGGTGTT CGTCATCGTG GCGGGCCGCA CGCGTGACCC CGTGCCCGAC
CCGGTGGCGC AGGCTGTAGG CACCGGCAAG GTGGTGGAAC TGACCAACGA CACCCTGCTG
CTGGCCCGCG ACGGCGCGGA ATACCAGATC GCGGACAGTG CCGCCCCCAT CCACGACGCG
GCGGGCGAAA TCACCGGCGC GGTGCTGGTG TTCACCGACG TCAGCGCCCA GTACGCGGCG
CGTCGCCAGT TGCTGGCCAG CGAGCAGCAG TTCCGCGCGG CCATCGAGGA AGCGCCCGTG
CCGGTGATGA TCCACGACGA GGACGGCACC GTGCTGGCCC TGAACCGCAG CTGGTGCGAA
CTTTCCGGCT ACACCCCCGG CGACGTGCCC ACCCTGGCTC GCTGGGAAGA ACTGGCCATG
CACGGCGAGC CGGTGCACGT GGCCGACGCT GCCGTTGGCG CGAGCCCTGG TGGCGGACAG
GACGGGCACG ACGGACTGGG CGGACTGGAC GGACAGGGCA GGCAGGCGCC CGGCAGGGCA
GCCGATCAGA CCGGCAGCAT CTCGGCAGGC AGCATCTCGG CGGGCGGCAC CGGCCACCCC
ACCAGCGATA CCGACACGCT GTACGCCCTT GGCGCACGCA GGGCCGACGG CGAGCACCCG
GTGACCTGCG CAGACGGCTC GGCCAGGGTG TGGGACTTCA GTTCCGCCCC GCTCGGCTCG
CTGCCCGATG GCCGCCGCGC GGTGATCCGC ATGGCCGTGG ACGTTACCGG CCGCAAGGAG
GCGGAAGCCG CCCTGCTGCG CGAAAAGGGC GCGGCGGAAG CCGCCAACCT GGCCAAATCC
GAATTCCTGG CCAACATGAG CCACGAAATC CGCACCCCGC TCAACGGCTC GCTGGGCATG
CTGCAACTGC TGCAAACCAC CACCCTGGAC GAGGAGCAGC AGGACTACCT GACCAGCGCC
ATCACCTCGG CCCGGCGGCT TACCCAGCTG CTGTCCGACG TGCTGGACCT TTCGCGGGTG
GAAGCGGGCA GGCTGGCCCT GCGCGCCGCA CCCTTCGCGC TGGAAGGGGT GGCCGGGTCC
ATCCGCGACA TCTTCCTGCT GCCCGCGCGC GAAAAGGAAC TGGAACTGGA CATCCGGCTG
GACCCGCGCC TGCCCGCGCG GCTGGTGGGC GACGAGGCCC GGCTGCGCCA GATCGCCTTC
AACCTGGTGG GCAACGCCAT AAAGTTCACC GATACGGGGT CGGTGACCGT GGAACTGACC
CCGCTGGGCC TGCCCCCGGC TGCACGCCCC GCCGGGAACG CGGCAGGCGA CGCGACCAGC
GGCCCGGCGG GAAACACCCC TGCCCACCGG CCCGCCCAAC TGCGCCTGCT GCTGGAGGTG
CGCGACACCG GCATCGGCAT TCCCGAATCG CATCTCGAAC GCATTTTCGA GCCGTTCAGC
CAGCTGGACG GCTCGCACGT GCGGCGGCAC GGCGGGGCGG GGCTGGGCCT GTCCATCGTG
CGGCGGCTGG TGGCCCTGAT GGGCGGCGAA CTTTCGCTGG AAAGCACGCC GGGGACAGGC
ACCAACATCT TCATCTCGCT GCCCTTTGGT GCCTTGTGGG ATGCCGACGG CGCGGACCGG
GCACCCGCGC GCGGGCCGTT CGTCCCGCTG GACGCCCCCG GCCCCACCGG GACGAAGGGG
ACGAACGGAA CGAACGGATC GGGCACGGCA GCCGGACATG ATGACGCCGG CGGCAATGCC
GGCGGGATGG GCATGCCCGC CCGCCATGCC GATGTTTCCG CCCTGCCCCG GGGCATGGCG
CAGTCCGGCA AGGGCCACTC CGGAATGCGG GGCGCAACGC CCGCGCAGCA GGCGGAACCC
GCCCCCGCCA ACGCCGCGCT GCCGGAACAC CAGGCCGGAC TGCATGTGCT GCTGGTGGAA
GACGATGCCG TGAACCAGCT TGCCGTGCGG CGCATGCTGG AAAAGTCGGG CATGACCGTA
ACCCTGGTCA CCGACGGCCA GCAGGCGCTG GACGCCCTGC ACCACGCCGC GTTCGACTGC
GTGGTCATGG ACGTGCAGAT GCCGGTCATG GACGGGCTGA CGGCCACCCG CGCCATCCGC
ACGGACCCGG CCTTCGCCTC CCGCGCGGCC ATACCCGTGG TGGCCATGAC CGCCCACGCC
ATGGTGGGCG ACCGCGAATC CTTCATGGAG GCGGGCATGG ACGACTACGT GTCGAAACCC
GTGGAAATGA GCGGACTGCG GCAGGCCATC CTGCGCGCCA TGCAGGCGCG GCACGGCTCA
TCGAAATAG
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| Protein sequence | MTRRPAISQS RNIAIAGGIM ALVCSGILLL WVNHGWHASL RGFLPVVKAL RIARADLLKG
QLAAERQLAG DADIPPGIHG AYFEQGAGRL YDAVDELLDP GDSALPALSA LRPFQEDAPE
MLVAQLRIYA DGISALNRTT NARLAAPRAE HPLLVLEQRR AFTELDRLGD ALERSVFSRF
VEDAERQSRL TRVVFVLWMV FLCGLTLLFK VAADRRRAAE MALVDSEERW QFALEGPGDG
VWDWNIRSGQ VFLSPRWKGL LGYEENEIGT SPSEWEGRVH PDDRQRVQAD MDMHLSGATD
TYQSEYRMRR KDGAYIWVLA RGRVMSLAED GTPLRFVGTH SDITARRQAE EALRASRENL
AVTLRSIGDA VMATDRAGRI TLMNPVAERL TGWPFAAAKG RHIGEVFVIV AGRTRDPVPD
PVAQAVGTGK VVELTNDTLL LARDGAEYQI ADSAAPIHDA AGEITGAVLV FTDVSAQYAA
RRQLLASEQQ FRAAIEEAPV PVMIHDEDGT VLALNRSWCE LSGYTPGDVP TLARWEELAM
HGEPVHVADA AVGASPGGGQ DGHDGLGGLD GQGRQAPGRA ADQTGSISAG SISAGGTGHP
TSDTDTLYAL GARRADGEHP VTCADGSARV WDFSSAPLGS LPDGRRAVIR MAVDVTGRKE
AEAALLREKG AAEAANLAKS EFLANMSHEI RTPLNGSLGM LQLLQTTTLD EEQQDYLTSA
ITSARRLTQL LSDVLDLSRV EAGRLALRAA PFALEGVAGS IRDIFLLPAR EKELELDIRL
DPRLPARLVG DEARLRQIAF NLVGNAIKFT DTGSVTVELT PLGLPPAARP AGNAAGDATS
GPAGNTPAHR PAQLRLLLEV RDTGIGIPES HLERIFEPFS QLDGSHVRRH GGAGLGLSIV
RRLVALMGGE LSLESTPGTG TNIFISLPFG ALWDADGADR APARGPFVPL DAPGPTGTKG
TNGTNGSGTA AGHDDAGGNA GGMGMPARHA DVSALPRGMA QSGKGHSGMR GATPAQQAEP
APANAALPEH QAGLHVLLVE DDAVNQLAVR RMLEKSGMTV TLVTDGQQAL DALHHAAFDC
VVMDVQMPVM DGLTATRAIR TDPAFASRAA IPVVAMTAHA MVGDRESFME AGMDDYVSKP
VEMSGLRQAI LRAMQARHGS SK
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