Gene DvMF_2283 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvMF_2283 
Symbol 
ID7174216 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris str. 'Miyazaki F' 
KingdomBacteria 
Replicon accessionNC_011769 
Strand- 
Start bp2871815 
End bp2872375 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content65% 
IMG OID643540813 
ProductTPR repeat-containing protein 
Protein accessionYP_002436693 
Protein GI218887372 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3063] Tfp pilus assembly protein PilF 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones80 
Fosmid unclonability p-value0.976866 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAACC ATCTCGATTA CGAAATCAAC AAGGAACTGG GCGAGTGCTA CCTTTTCATG 
GGTGACCTGG AAAAGGCCGA AGAGTACTAC CGCAAGGCCG CCGGCAGCAA CGGCGTGCAT 
CCGGACCCGT ACCTCGGGCT CGCCACCATC GCCGTGCAGC GCGGCAACCT TGAAGCCGCC 
CTGGTGCTGT ACCGCAAGGC CGCCAACATC GAAGCCAACG ACAAGTCGCT GGCGGGCATG 
GGCCTGGTGG AGATGGAAAC CGGCGCGCAC GCCGAGGCCT TCGACCATTT CGTGGCCGCG 
CTGGGCATGA ACCCCGGCAA CCTGGTGGCC ATGAACGGCC TGCTGCGCCT TGGCTACCAC 
CTTGGCCGCA TCGAAGAAGT GGTGGCCCAC CTGCGGGCCT TCCTGGAACT TTCCCCCGAA 
AAGGACAACG TACGCTTCTC GCTGGCCGGG TGCCTGATCT CCCTTGGCCG CAAGGACGAG 
GCGCGGGCCG AACTCGAGGT CATTCTCGAC CGCGCGCCCG ACCACGCCGA CGCCCGCGAA 
ATGTACGCCC TGATCGGGTA G
 
Protein sequence
MSNHLDYEIN KELGECYLFM GDLEKAEEYY RKAAGSNGVH PDPYLGLATI AVQRGNLEAA 
LVLYRKAANI EANDKSLAGM GLVEMETGAH AEAFDHFVAA LGMNPGNLVA MNGLLRLGYH 
LGRIEEVVAH LRAFLELSPE KDNVRFSLAG CLISLGRKDE ARAELEVILD RAPDHADARE 
MYALIG