| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_2273 |
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| Symbol | |
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| ID | 7174206 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011769 |
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| Strand | + |
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| Start bp | 2856128 |
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| End bp | 2859799 |
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| Gene Length | 3672 bp |
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| Protein Length | 1223 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 643540804 |
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| Product | PAS/PAC sensor hybrid histidine kinase |
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| Protein accession | YP_002436684 |
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| Protein GI | 218887363 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 91 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGGGCC CCCTGCGCAC CACGCTTGCG CGCTGCTGGG CGCGTTTTCC GCTGCGGCCC
CTGCTGCGGC ATGTGGTGCC GCCCGCCCCG GGCCTGCGCC TGCGGATGGT GGGGTGGTGT
TCTCTGGTCT GCCTGTTGCC GCTGGGCATC GTCAGCGCGG TGTTCGTGCA GGTGACCACG
GTGCAGACCG ACAGCTACCT GCATGCGCAG GGGCGCACCC TGGCCGATGC GGCCTCGTTG
CAGCTCACCC GCCTGTCGCG CACGGCAGAG GCCCTGGCCC GCGTGGTGGC CGGGCTGCGG
GTGGAATACG ACGGCGACAT GCCGGGGCTG CGCCTGCGCC TGTCCGAACT GCACGGCCTG
TGGCCCCGCG CCTGCATCGA GGTGTTCGAC ATGGGGGCCG AACCCGTGGT GCGGCTGCTG
CCCGCCAGCG GCGGGCCCGA GCGGCTTGCG GGCGGCGTCA CGCCCAACGG CGCCACCACC
GACGGGGCGT TGGTGGTACG CCAGGCGTTG CGGGGGCTGA CGCGGCGCGA CGTGTTCCGG
TCCGCCGACG GGCTGGCCAT CAAGGCGGTG GTGCCGATCA TCGTGCCCCT GGAACAGGCG
GGTGCACGCC ACGGCGGGAA AATCCGGCGC CCCCTGCCCA CGCCCATGGG ACCGGCATCC
CTGCCGGAAT CTTCGCTGGG CGGCATGGTT CCGTTGCCGC CCCAGATGTC CCTGCCGAGC
CAGATGGAAC AGGCCCCGTA CGCGCCGTTT GCATCCGATG CGGAGGAGAT CACGGGCCAG
GCGGACCTGG AAGGGCTGGC GGCCCGGCAG CACGGGCGCA TCGTGGGGGC GGCGGTGGTG
TCGTTTCCCA TGAACAGGTC GCTGTTGCGC GGCCTGGGCG ATGCTGTGCG CGCCGACGTG
GCGGTGTTCG ACCTGGGCGG CGAGCGTCCG CGCGGCACGC TGTTTCCCGG TGACGGCACC
GCCGACGTGG CCGACTGGCC GGACCGGCCC GACCTTGCGC AGGGTGCGTC GCCTGGTGGA
TTGGCTGGCG GGGGTGTGGC GGGCGGTGCG CATTCCGGCA CCGGCGCGTC TGGCGGCAAT
GTTTCCGGGG GCGGCTTTTT CGGCAGGGCG CAGGGTTTCG GCCAGGCGCA GGGCCTGCCC
TTCCTGCAAC GCTATGAACA GGTGGCGGGC AAGCCCTATC TGGTCAGCTA CCAGCCCCTG
CCGGGGGGCA GCGGCATGCC CGTGGGCGCG CTGGCCGTGT TCGTGGACGT GGAGCCGCAA
CGCTCGCGCC TGCGCACCGC CGTGGAATAC ACCCTGCTGG CCGCCGTGGT GGCCCTTGGG
CTGTCCTTGT GCACGGGGTT TCTCATCGCG GACCGGGTGG TGCGGCCCCT GCATGAACTG
CTGCACGCCA TCCGGCGCAT TTCGCTCGGC AACTACAGCG AACGGCTGCC CCCGGCGGGC
ATGGCCGAGA TAGGCCAGCT GGCCCAGGCC GTGAACCACA TGGCCTCCAC GCTGGAGGAA
AACCGCACCA GCCTTCTGGG CGCCTTGCAG GAAAAGGTGG AGTCGGGCGA GCGCCTGGCC
CGCGCCAACC GCGAACTGGA GCTGCTGAAC TGGGAACTTA CCCGCGCCCA GGCCAACTAC
CGGCGCATTT TCGAGGAATC GGCGCAGGGC ATCTACCAGT CCACGCCGCA GGGCCGTTTT
TTGCGGACGA ACCCGGCCAT GGCGCGCATG TTCGGCTATT CTTCGCCGTA CGAGATGGTG
TCGTCGGTGA CGGACATCGG CGAGCAGTTC TACGTGCGCC CCGGCGAGCG CGAGGAACTG
CTGCGTCGCC TGCGCCAGGA GGGGCGGGTG TCGCTGGAAA CCTGCCTGCG CAGGCGTGAC
GCCAGCGTGG TGCACGTGGC GCTGACCGCC CGCGCGGTGA CCGGAGAGAC CGGCGAGCAA
CTGTACATCG AGGGCGCGGT GCACGACATC ACCGAGCGCG TCGAGCGCCA CCGCGCCGAG
CGCGAGCGCG AGGCCGCCGA GGCGGCCAGC CGCGCCAAGA CGCAACTGCT GGCCCGCATG
AGCCACGAGG TGCGCACCCC GCTCAACGCC CTGCTGGGCA TGGCCGACGT GCTGGACCGC
ACCCCCCTGG AGCCGGAACA GCGCGGTTAT CTGGACGTGC TGCGCAATTC CGGCCATTCG
CTGCTGGCGC TGCTGAACGA CGTGCTGGAC TTTTCGCGCC TGGAAGCCGG ACGGGTGGTG
CCGGAGCGGG TGGGCTTTCG TCTGGGCGAG ATCATGGCGC AGGTCTGCCG CCAGATGGAA
CCTGCCGCCA GCGCGGACGG GCGCGGCCTG CGCCTGGACT GGGCCGTGCT GCCCGGCGTG
CCCGACGCGC TGGTGGGCGA CCCGCTGCGG CTGCGCCAGA TTCTGGGCAA CCTGGTCTCC
AACGCGGTAA AGTTCACCCC TGCCGGTCGG GTGATGGTGC TGGCCCAGCC CGCCGACGGC
AACGTGCCCG ACCGCGATGC CGGGCCAGTC GCGTCCCCGG TCGCATCCCC AGTCGCGCAC
CCCGCCACGC CTTCCGCGTC ACCGGACGAG GCGCCTTGCC GCCCGTCCTC CGGCAGGCGG
ATGGAAGTGC TGTTTTCCGT GGCGGACACG GGCATCGGCA TTCCGCCGGA ACATCAGGAC
GTGGTGTTCG AAAGCTTCAT GCAGGCGGAT TCGTCCATTA CCCGCCAGTA CGGCGGCACG
GGACTGGGGC TGTCCATCTG CCGGGCGCTG GTGGAAATGC TGGGCGGCGC CATCTGGCTT
GAAAGCGCCC CCGGCAGGGG CACCACCGTG TATTTCACCC TGCCCATGCA GCCCGCCGGC
GAAGCCGTCT GCGGGCCGAA TCCCGCGGTC CCGGCGAATC TGGCGGCACC GGCGGAAACG
CGGACCCCCG GTGCTTCCGA GCCCTCCGAG GGCACGGTCA TGCCGGTTTC ACCTGCCGCA
TCAGGCGCAG CCGTCCCGTT GAGCGCGCGG GATGTTCCGA CCGACGCACG GGCCAGCGTA
CAGGCCTACC CCGTCATCCC AGTCACGCCA GTCACTCCAG TCACCCCGGG CGATGCTGTC
GTTCGGGTCG GGGGTGCGGC GACGGAAGGC GGGGCCGTCA CCGGTGCCGC CGGGCTGGCC
GAAACTCCGG TCCCGCCAGA CTTGCCGGAC GCGCGGCTCG GCGACGAGGA CTCCGGACCG
CAACGGTCCC TGTCCATCCT GCTGGTGGAG GACAGCCCCA GCAACCGCCT GCTCTTTTCG
CTGTACCTGC GGGGACGCCC CTGCGCCATC ACCGAGGTCC ACAACGGCGA GGAGGGCGTG
GCCGCCTACG CCACGGGACG CTTCGACCTG GTGTTCATGG ACATCGAGAT GCCGGTGCTG
GACGGCTATC GGGCCACGCG GGCCATCCGC GCCCTGGAGC GCGAACGGGG CCTGCCGCCC
ACGCCGATCA TTGCCCTGAC GGCGCACGTG GTGGGTGAAT TCCGCAACGA CTGCGCGGCG
GCGGGGTGCA CCGGCTTTCT GGCCAAGCCC TTTTCGCGCG GGGAATTGCT GCGCTGCATG
GCCCGCCACT GCGGGGGCGG CGATGCGGCG GGGGATGCCT GGCAGGCCGG GAGCGATCTG
GCTGGCGGCA GTGATTTCAC CGAGGGGGCG GGATCTCCGG CGGGCAATCA GTCCAGTCCG
GGCCCGGAGT AA
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| Protein sequence | MMGPLRTTLA RCWARFPLRP LLRHVVPPAP GLRLRMVGWC SLVCLLPLGI VSAVFVQVTT
VQTDSYLHAQ GRTLADAASL QLTRLSRTAE ALARVVAGLR VEYDGDMPGL RLRLSELHGL
WPRACIEVFD MGAEPVVRLL PASGGPERLA GGVTPNGATT DGALVVRQAL RGLTRRDVFR
SADGLAIKAV VPIIVPLEQA GARHGGKIRR PLPTPMGPAS LPESSLGGMV PLPPQMSLPS
QMEQAPYAPF ASDAEEITGQ ADLEGLAARQ HGRIVGAAVV SFPMNRSLLR GLGDAVRADV
AVFDLGGERP RGTLFPGDGT ADVADWPDRP DLAQGASPGG LAGGGVAGGA HSGTGASGGN
VSGGGFFGRA QGFGQAQGLP FLQRYEQVAG KPYLVSYQPL PGGSGMPVGA LAVFVDVEPQ
RSRLRTAVEY TLLAAVVALG LSLCTGFLIA DRVVRPLHEL LHAIRRISLG NYSERLPPAG
MAEIGQLAQA VNHMASTLEE NRTSLLGALQ EKVESGERLA RANRELELLN WELTRAQANY
RRIFEESAQG IYQSTPQGRF LRTNPAMARM FGYSSPYEMV SSVTDIGEQF YVRPGEREEL
LRRLRQEGRV SLETCLRRRD ASVVHVALTA RAVTGETGEQ LYIEGAVHDI TERVERHRAE
REREAAEAAS RAKTQLLARM SHEVRTPLNA LLGMADVLDR TPLEPEQRGY LDVLRNSGHS
LLALLNDVLD FSRLEAGRVV PERVGFRLGE IMAQVCRQME PAASADGRGL RLDWAVLPGV
PDALVGDPLR LRQILGNLVS NAVKFTPAGR VMVLAQPADG NVPDRDAGPV ASPVASPVAH
PATPSASPDE APCRPSSGRR MEVLFSVADT GIGIPPEHQD VVFESFMQAD SSITRQYGGT
GLGLSICRAL VEMLGGAIWL ESAPGRGTTV YFTLPMQPAG EAVCGPNPAV PANLAAPAET
RTPGASEPSE GTVMPVSPAA SGAAVPLSAR DVPTDARASV QAYPVIPVTP VTPVTPGDAV
VRVGGAATEG GAVTGAAGLA ETPVPPDLPD ARLGDEDSGP QRSLSILLVE DSPSNRLLFS
LYLRGRPCAI TEVHNGEEGV AAYATGRFDL VFMDIEMPVL DGYRATRAIR ALERERGLPP
TPIIALTAHV VGEFRNDCAA AGCTGFLAKP FSRGELLRCM ARHCGGGDAA GDAWQAGSDL
AGGSDFTEGA GSPAGNQSSP GPE
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