| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_2218 |
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| Symbol | |
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| ID | 7174140 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011769 |
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| Strand | + |
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| Start bp | 2770936 |
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| End bp | 2772792 |
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| Gene Length | 1857 bp |
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| Protein Length | 618 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 643540738 |
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| Product | Lytic transglycosylase catalytic |
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| Protein accession | YP_002436629 |
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| Protein GI | 218887308 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 74 |
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| Fosmid unclonability p-value | 0.70593 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGCGAA CCAGACTCCT GTCTTCCGCC CTGCGCGCGC GCCGTGCCGT CCGGCACGTG
CTTGTGCTTG TGGCGGTGGC GTTGTTGGCC GCCGGCTGCG CGCCCAAGAA GAATCTTCCC
CCCATTCAGC CCGCAGAGGC CTGCCCGGTG CCGTCCGGCG CCACCGCCAC CGCCGCCGAA
CCCGAAGAGG TGGTGGAACT GCCCATACCG CCCGCCGACG ACGGCGTGCC CCTTACCCCG
CAGGAATGGG CGGCCCTCAA TTCCACCGGC GAACTGGACA AGAACCTTTC CCCGGAAGCC
CGGCGCGACG TGGAATTGCA CTTCAAGTAT TTCACCCACC GCGCGCGCGG CACCTTCGAA
CGCTACCTGA AGCGTTCGCA GAACTACCTG CCGCACATCC GCGAGGTGTT CCGCCAGCAG
GGCATTCCCG AAGAGATCGC CTATCTCGCC ATCGTCGAAA GCGGGTTCAA CCCCAATGCC
GTGTCCCCGG CGGGCGCGGT GGGGGTGTGG CAGTTCATGC CCTACACCGG CATGCGCTAC
GGCCTGTCGT ACAGCTGGTG GATGGACGAG CGGCGCGACC CGTACAAGTC GGCCCGCGCC
GCGGCGGATT ATCTGCAGAA GCTGTACGGC GACTTCGGCG ACTGGCACCT GGCCATGGCC
GCGTACAACG CGGGCGAGGG CAAGATTTCG CGGGCGCTGG AAGGCACCGG GGCCGAAGGG
TTCTTCGACC TGCGCGCCAA GAACCACATG CTCGACGGCA AGGCCCAGCT GAAGGACGAA
ACGCGCCAGT ACGTGCCCCG GTTCATCGCC GTGGCCAAGA TCATGCGCAA TCTGGAATCC
CTGGGCTTTC AGGCCCCGGA CTACAGCTGC CCGCCCAAGC TGGAGCAGCT GCGGGTAAAG
CCCGGCACCG ACCTGATGGC CCTGGCCCAG GCCATGGGCC AGAACTGGAG CGACTTTTCC
GCCAACAACC CGGCCTTCCG GCGCTACATT TCGCCGCCTG ATGCCCACAC CACCGTCTAT
GTGCACCCCA TGCACCTGGA AGCGGCCACC GCCTTCCTGG CCAAGCCGCA GCAGCGTAGC
TACGCGGGCT GGCGGGTGTA CAAGGTGCGC CAGGGCGATA CGCTGGACCG CATCGGCAAG
CGCTGCGGGG TGCCCGTTTC GGTGCTGAAG CGGGTCAACA AGGCCAGCGG CAAATTGCAG
GTGGGGCAGG AGCTGATGAT CCCCGGCGGG GGCGACGCAA CGGACTTCAC CGCCCAGGCG
GAGACGCCGG CGTCGAAGTC GGCGGCTTCG GCCAAGGGCG GCAAGGCCGT TGCGGACAAG
CAGGACAAAT CGGACAAGTC GGACAGGTCG TCCTCTGTCC GCACCCGCGA CATCGCCGAG
CGCCGCGCCA CGTACATCGT CAAGCAGGGC GACACCCTGT ACGGCATCGC CAAGGCCCAG
GGCAGCAGTG TGGAAACCCT GCAGAAGGCC AACGGCCTTT CGGGTATCGC CCTGCAACTG
GGGCAGAAGC TGTACATCCC CGATGCCGGG GCCGAGGCCA CGGCCATCGC CAGGCAGGAA
GCGGAGGCCG CCAACAAGGC CATCGTGGCC AGCGCGTCTC GCGGCGGTGC CGAGCGGGCC
GCCACGCCCG TGGCCGTGGC CACCGCGTCC AAGAGTGCGG GGGCCAAGCC CGCAGCCAGC
CAGGCTGCCG CGCCGTCGGG CCGGGCCATC GTGTACAAGG TGCAGGAAGG CGACACCATG
TGGGCCATCG CCCGCAAGTT CAACGTGCCG CCCAAGGAAC TGCTGCGCTG GAACAACCTG
GAGCGCGATG CGCAGTTGAA GCCCGGCGAC CAGATCACCG TGCACGCCGC CCAGTAG
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| Protein sequence | MQRTRLLSSA LRARRAVRHV LVLVAVALLA AGCAPKKNLP PIQPAEACPV PSGATATAAE
PEEVVELPIP PADDGVPLTP QEWAALNSTG ELDKNLSPEA RRDVELHFKY FTHRARGTFE
RYLKRSQNYL PHIREVFRQQ GIPEEIAYLA IVESGFNPNA VSPAGAVGVW QFMPYTGMRY
GLSYSWWMDE RRDPYKSARA AADYLQKLYG DFGDWHLAMA AYNAGEGKIS RALEGTGAEG
FFDLRAKNHM LDGKAQLKDE TRQYVPRFIA VAKIMRNLES LGFQAPDYSC PPKLEQLRVK
PGTDLMALAQ AMGQNWSDFS ANNPAFRRYI SPPDAHTTVY VHPMHLEAAT AFLAKPQQRS
YAGWRVYKVR QGDTLDRIGK RCGVPVSVLK RVNKASGKLQ VGQELMIPGG GDATDFTAQA
ETPASKSAAS AKGGKAVADK QDKSDKSDRS SSVRTRDIAE RRATYIVKQG DTLYGIAKAQ
GSSVETLQKA NGLSGIALQL GQKLYIPDAG AEATAIARQE AEAANKAIVA SASRGGAERA
ATPVAVATAS KSAGAKPAAS QAAAPSGRAI VYKVQEGDTM WAIARKFNVP PKELLRWNNL
ERDAQLKPGD QITVHAAQ
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