| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_2213 |
|---|
| Symbol | |
|---|
| ID | 7174135 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011769 |
|---|
| Strand | + |
|---|
| Start bp | 2766541 |
|---|
| End bp | 2767083 |
|---|
| Gene Length | 543 bp |
|---|
| Protein Length | 180 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 643540733 |
|---|
| Product | flagellar motor switch protein FliN |
|---|
| Protein accession | YP_002436624 |
|---|
| Protein GI | 218887303 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG1886] Flagellar motor switch/type III secretory pathway protein |
|---|
| TIGRFAM ID | [TIGR02480] flagellar motor switch protein FliN |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 77 |
|---|
| Fosmid unclonability p-value | 0.728739 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGACG GCAAGGATGT CGATCAGGAT CTGCTGGCGG CCCAGTGGGC TGCCGCCCTG
GAAGGGGAAG ACGACGAGGA TGGCGGCGGC AAGGCCTCGT CCGCTGTCGG GGGCGGCGAG
GACGACGCCC GCCTGGCCGA GGAATGGGCC AAGGCCCTGG CCAGTGAAGA ACAGACCCAG
CTGAAGAAGG AAAAGGAACA GGGCTTCTTT GCGTCTGCCG CGCGTGAGGC CAAGTTCAAG
GATTTGACGG AAGAGGCCAA GTCGCCCCGG CCCGACAGCG GTCGGCGCGA ACTGGACTTC
ATCCTGGACA TTCCGCTGGA CGTCTCGGCG GAACTGGGCC GCACCCGCCT GCTGATCAAC
GAACTGCTCC AGCTGGGGCA GGGGTCGGTG GTCGAACTGA ACAAGCTGGC TGGCGAACCG
CTGGAAGTGT ACGTCAACGG CAAGCTGGTG GCGCGCGGCG AGGCCGTGGT CATCAACGAA
AAGTTCGGCG TGCGCCTGAC CGACATCATC AGCCCCATCG AACGGGTGAA GCAGCTTGCT
TAA
|
|---|
| Protein sequence | MSDGKDVDQD LLAAQWAAAL EGEDDEDGGG KASSAVGGGE DDARLAEEWA KALASEEQTQ
LKKEKEQGFF ASAAREAKFK DLTEEAKSPR PDSGRRELDF ILDIPLDVSA ELGRTRLLIN
ELLQLGQGSV VELNKLAGEP LEVYVNGKLV ARGEAVVINE KFGVRLTDII SPIERVKQLA
|
|---|
| |