| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_2208 |
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| Symbol | |
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| ID | 7174130 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011769 |
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| Strand | + |
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| Start bp | 2762163 |
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| End bp | 2762981 |
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| Gene Length | 819 bp |
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| Protein Length | 272 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 643540728 |
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| Product | alanine racemase domain protein |
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| Protein accession | YP_002436619 |
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| Protein GI | 218887298 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0325] Predicted enzyme with a TIM-barrel fold |
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| TIGRFAM ID | [TIGR00044] pyridoxal phosphate enzyme, YggS family |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 77 |
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| Fosmid unclonability p-value | 0.834769 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGCACG ATATTGCCGC CGCCTCCGCC TTTCTGCCGC CCGAAGCCGC ACAGTCCCTG
CTGGACCGCT GGGCCGCCGT GCGCGCCCGC GTGGACGGCG CCGCCCGCGC CGCCGGGCGC
GACCCCGCCG GGGTGACCCT GGTGGCCGTG TCCAAGTTTC ACCCCGCCGC GTCCGTGGCC
GCGCTGTCCG CTGCCGGGCA GCGTGATTTT GGCGAGAATT ATGTGCAGGA AGCACTACGG
AAACAGGCCG AAGTTGCCGA TATGACGGGC ATGGGTCCGG ATGCGGCCTC CGGAACCAAG
GTGGCGGGGG GCGCAGCCCC GCGCTGGCAT TTCATCGGCC ATCTGCAAAG CAACAAGGCC
AAGGACGTGG TGGGGCGCTT TGCCCTGCTG CACACCGTGG ATTCGGAAGC CCTGGCCCGC
AAGCTGGACC AGCGGCTTTC CGGCATGCCC GCGCAGGGGG CCGGGGGCGT TGCGCCCGGT
CAGGACATCT TGCTGCAGGT GAACATAGGT GACGAGGAGC AGAAATCCGG GGTGGACCCG
GACGACCTGC CCGCCCTGAC GGACGCCGTG CTGGCTCTGC CGCGCCTGCG CCTGCTGGGG
CTGATGTGCA TGCCGCCCAT TTTCGACGAC GGCGAGGCCT CGCGTCCGTA CTTTGCCCGG
CTGCGCGAAC TGCGCGATGC GCTGTCCGCC CGTGTGGGCC TGCCCCTGCC GCACCTGTCC
ATGGGCATGT CGCACGACGT GGAAGTGGCC GTGGCCGAAG GGGCCACCAT CGTGCGGGTG
GGGACGGATA TCTTCGGCCC GCGACCGGCC CGCCTCTGA
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| Protein sequence | MPHDIAAASA FLPPEAAQSL LDRWAAVRAR VDGAARAAGR DPAGVTLVAV SKFHPAASVA
ALSAAGQRDF GENYVQEALR KQAEVADMTG MGPDAASGTK VAGGAAPRWH FIGHLQSNKA
KDVVGRFALL HTVDSEALAR KLDQRLSGMP AQGAGGVAPG QDILLQVNIG DEEQKSGVDP
DDLPALTDAV LALPRLRLLG LMCMPPIFDD GEASRPYFAR LRELRDALSA RVGLPLPHLS
MGMSHDVEVA VAEGATIVRV GTDIFGPRPA RL
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