| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_2163 |
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| Symbol | |
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| ID | 7174085 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011769 |
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| Strand | - |
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| Start bp | 2696715 |
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| End bp | 2699951 |
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| Gene Length | 3237 bp |
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| Protein Length | 1078 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 643540683 |
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| Product | transporter, hydrophobe/amphiphile efflux-1 (HAE1) family |
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| Protein accession | YP_002436574 |
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| Protein GI | 218887253 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 82 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATATCGC GTTTCTTCAT CCATCGCCCC ATCTTCGCGT GCGTGATCTC CATCGTGATC
ATGCTGGCGG GGTTCATGGC CATGCGAGCG CTGCCCATCG CGCAGTACCC GGAAATCGTT
CCGCCGCAGG TCATCGTCTC CGCCGTGTAT CCCGGCGCCA GCCCCGAGGT CATCGCGGCC
ACGGTGGCCT CGCCGCTGGA ACAGCAGATC AACGGCGTGG ACGGCATGCT GTACATGAAC
TCGGTCAGCG CCGGTAACGG CCAGATGACC ATTTCCGTGT CCTTCGCCGT GGGCACCGAC
CCCGACCAGG CCACCATCAA CGTCAACAAC CGCGTGCAGG CCGCCACCGC ATCCCTGCCC
GAGGAAGTGC GCCGCCAGGG CGTCACCGTG ACCAAGCGGT CGCCCTCCAT CCTCCAGGTG
GCCAACATGT TCTCGCCCGA CGGGCGGTAC GATTCGGTCT ACATCAGCAA CTACGTCCTG
GTGAACGTGG TGGACGAGCT GAAGCGCCTT CCGGGCGTTG GCGATGCCTC CATCTTCGGC
GCCAAGGACT ATTCCATGCG CATCTGGCTG CACCCGGACA AGCTGGCCCA GCTCAAGCTG
ACCCCCGGCG ACGTGGCGCT GGCCATCCGC GAGCAGAACG CCCAGTTCGC CGCCGGGCGC
ATCGGCCAGG AACCGTCCAG CAGCCCGCTG GAACTGAACT ACCTGGTCAC CACCAAGGGG
CGCCTGACCA ACCCCGAGGA ATTCGAAAAC ATCATCCTGC GGGCAGAGCC CGACGGCTCC
ACCCTGCTGC TCAAGCACGT GGCCCGTGTG GAACTGGGCG CCAAGGACTA CGACGTCCGC
ACCCAACTCA ACGGCAAGCC CACCGTGGCC GTGGGCGTGT TCCTGACGCC CGGCGCCAAC
GCGCTGGAAA CGGCAGACCG CGTGGCCGCA AAGATGCAGG AGCTGTCGCA GCGCTTCCCC
GACGGCATCA GCTACTCCAT CCCCTACGAC ACCACCAAGT TCGTGCGCAT CTCCATCACA
GAGGTGGTGC ACACCCTGGT GGAAGCCATG GTGCTGGTGT TCCTGGTGGT GTTCCTGTTC
CTGCAGAACT GGCGGGCCAC GCTCATACCC TGCCTTGCGG TGCCGGTGTC CATCGTGGGC
ACCTTCGCGG GCATGTACGC GCTGGGCTTC TCCATCAACA CATTGACATT GTTCGGCCTG
GTGCTGGCCA TCGGCATCGT GGTGGACGAC GCCATCGTGG TGCTGGAAAA CGTGGAACGC
ATCATGTCCT CCGAGCGGCT GACGCCGCGC AAGGCCACCA TCAAGGCCAT GGAGGAAGTG
ACCGGGCCGG TCATCGCCAT CGTGCTGGTG CTGTGCTCGG TGTTCGTCCC CGTGGCCTTC
ATGGGCGGCC TTGCCGGGCA GATGTACAAG CAGTTCGCCA TCACCATCGC GGTGTCGGTG
GTCATCTCCG GCCTGGTGGC CCTGACGCTG ACACCCGCCC TGTGCGCGCT GATGCTGAAG
CCCGGCCATC ATGAGCCGCC CGCGTTCTTC CGCTGGTTCA ACAACTGGTT CGAACGCGTC
ACCCACCGCT ACACCGGCGG GGTGGCCTTC CTGATCCGCC GCGCGGGCCT TGCGCTGGTG
CTGTTCGCCT GCCTGGGCGG CGCCACCTGG CATCTCTTCC AGGTGGTGCC CGGCGGCCTC
GCCCCGGACG AAGACCAGGG CTACATCATC GGCCTGTCCA TCCTGCCCGA CGGGGCCAGC
CTGCAACGCA CCCGCGTGGT GGCCGACCTG ATGGACAAGA GCCACATGGA AGACCCCCGC
GTGGCCAACC TGATCACCCT GACCGGCTAC GACCTGCTGT CCGGGGTGCC CAAGCCCAAC
TTCGTCACCT CGTTCGTGCC GCTGAAACCG TGGGACGAGC GCAAGGGCGC GGGGCAGTCT
TCGTTCGACT ACGCCCGCAA GGTGTTCGGC GTGGGCATGG GCGTGCCGGA AGGCATCGTG
CTGGCCTTCA ACCCGCCGCC CATCTCGGGC ATGAGCAACA CCGGCGGCTT CGAACTGTAC
GTGCAGAACC GCGGCGAAGG CGACAGCAAG GCCCTGGCGG GCATGGTGGG CAAGTTCATC
GCCGCCGCCG CCAAGCGGCC TGAACTGGCG GGCGTGCAGA CCACCTTCAG CGCCAACGCG
CCACAGCTGT TCATCAGCCT GGACCGCAAC AAGGCAAAGG CCCTGGGCGT GCCGGTGAAC
ACCATCTTCG ACACCATGCA GGCCACCTTT GGCGCCAGCT ACGTGAACGA CTTCAACAAG
TTCGGTCGTA CCTTCAAGGT GCAGATGCAG TCCGAGGCCG ACTTCCGCGC CCGCCCGGCG
GACGTGGCCA ACGTGTTCGT GCGGGCCACC TCGGGCGAGA TGATCCCCCT CACCTCGCTG
GTGGACGTGC AGGAAGTGAC CGGCCCCGAA GTGGTGGAGC GCTTCAACGT GTTCCCCGCC
GCCAAGGTGG TGGGCGGCCC CGCCCCCGGG TACAGCTCCG GCCAGGCCAT AGCCGCCATC
GAAGAAGTGG CGGCGGAGGT CATGCCGCCG GAATACACCC TGGCCTGGTC CGGTTCCGCC
TACCAGGAAA AGCAGACCGG CGGCTCGTCG TCGCTGGTGT TCGTGCTGGG CCTGGTCATG
GTCTTCCTGA TCCTGGCGGC GCAGTACGAA AAGTGGTCGC TGCCGCTGGC GGTCATCATG
GCCGTGCCGT TCGCCCTGTT CGGGGCCATC ACCGCAGTGT GGCTGCGCGG CCTTGCCAAT
GACGTGTACC TGCAGATCTC GCTGGTCACG CTCATCGGCC TTGCGGCCAA GAACGCCATC
CTCATCGTGG AATTCGCGGT GATCAAGCGG CACGAGGGGC TTTCGCTGGT GGAATCGGCC
ATCGAGGCCG CCCGCCTGCG CTTCCGCCCC ATCATCATGA CCTCGCTGGC CTTCGTGCTG
GGCTGCGTGC CGCTGGCCAT CAGCAGCGGC GCGGGCGCGG CCAGCCGTCA CTCCATCGGC
ACCGGCGTCA TCGGCGGAAT GCTGGCGGCG ACCTTCATCG CCACCTTCTT CATCCCCATG
TTCTACCGGC TGATCATGGG CGTGAGCGAA CGCATGCGCG GCACCGAGGC AATGCGCACC
ATGGCCGTGG GCAAGTACTG CGAAGAGGAA CGCCACTCGG CCTTCGAAGA CCTGCCGCCG
GACTACGTGG CGGGCGCGGG CGACGACGCC TGCAACAAGG AGAAGCGCCA TGATTAG
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| Protein sequence | MISRFFIHRP IFACVISIVI MLAGFMAMRA LPIAQYPEIV PPQVIVSAVY PGASPEVIAA
TVASPLEQQI NGVDGMLYMN SVSAGNGQMT ISVSFAVGTD PDQATINVNN RVQAATASLP
EEVRRQGVTV TKRSPSILQV ANMFSPDGRY DSVYISNYVL VNVVDELKRL PGVGDASIFG
AKDYSMRIWL HPDKLAQLKL TPGDVALAIR EQNAQFAAGR IGQEPSSSPL ELNYLVTTKG
RLTNPEEFEN IILRAEPDGS TLLLKHVARV ELGAKDYDVR TQLNGKPTVA VGVFLTPGAN
ALETADRVAA KMQELSQRFP DGISYSIPYD TTKFVRISIT EVVHTLVEAM VLVFLVVFLF
LQNWRATLIP CLAVPVSIVG TFAGMYALGF SINTLTLFGL VLAIGIVVDD AIVVLENVER
IMSSERLTPR KATIKAMEEV TGPVIAIVLV LCSVFVPVAF MGGLAGQMYK QFAITIAVSV
VISGLVALTL TPALCALMLK PGHHEPPAFF RWFNNWFERV THRYTGGVAF LIRRAGLALV
LFACLGGATW HLFQVVPGGL APDEDQGYII GLSILPDGAS LQRTRVVADL MDKSHMEDPR
VANLITLTGY DLLSGVPKPN FVTSFVPLKP WDERKGAGQS SFDYARKVFG VGMGVPEGIV
LAFNPPPISG MSNTGGFELY VQNRGEGDSK ALAGMVGKFI AAAAKRPELA GVQTTFSANA
PQLFISLDRN KAKALGVPVN TIFDTMQATF GASYVNDFNK FGRTFKVQMQ SEADFRARPA
DVANVFVRAT SGEMIPLTSL VDVQEVTGPE VVERFNVFPA AKVVGGPAPG YSSGQAIAAI
EEVAAEVMPP EYTLAWSGSA YQEKQTGGSS SLVFVLGLVM VFLILAAQYE KWSLPLAVIM
AVPFALFGAI TAVWLRGLAN DVYLQISLVT LIGLAAKNAI LIVEFAVIKR HEGLSLVESA
IEAARLRFRP IIMTSLAFVL GCVPLAISSG AGAASRHSIG TGVIGGMLAA TFIATFFIPM
FYRLIMGVSE RMRGTEAMRT MAVGKYCEEE RHSAFEDLPP DYVAGAGDDA CNKEKRHD
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