Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DvMF_2159 |
Symbol | |
ID | 7174081 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
Kingdom | Bacteria |
Replicon accession | NC_011769 |
Strand | + |
Start bp | 2692492 |
End bp | 2694081 |
Gene Length | 1590 bp |
Protein Length | 529 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 643540679 |
Product | RND efflux system, outer membrane lipoprotein, NodT family |
Protein accession | YP_002436570 |
Protein GI | 218887249 |
COG category | [M] Cell wall/membrane/envelope biogenesis [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1538] Outer membrane protein |
TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 85 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGTCTG GCCTGTTGGC AACCGGCCTG ATGGTAACCG TCCTTGCGCT GTCCGGCTGC GCCGTGGGGC CGGACTACGA CCGCCCCGCC CCGCCCGCCG CGCCCACGGA ATGGAGCGCG GCCAAGACCC GCCCCGAAAT TTCCGGTGAT GTTTCCGGCA GCGGGGCCCC TGCCGAGTCT GCCGGTTCGG TGGCGCCCCG CGCCGCCGTA AGCGCCGCCA CCCCGGACGG CCAGTGGTGG GAACGCATGG GCGACCCGCA GCTGTCGGAA CTGGTGGCCA TGGCCGTGGG GCACAACAAC GACGCCCTCA TCGCCGCCGC CAACCTGCGC GAGGCCCGCG CCGTGGTGGG CGTGGCCCGT GGCGCGCTGC TGCCGGCAGC GGCGGCGGGC GGCAGCTTCG AGCGCAGCCG GGTAAGCACC AACACCCTTA CCGGGCAATC GCTGGAAATG GCCCGCATGC CCATTGAAAG CGACCTGTAC CAGGCCGGGT TCGACGCCCG GTGGGAAATA GACATCTTCG GCGGTGCCCG GCGCGGCGTG GAAGCGGCCC GCGCCCGTCA GCAGGCGGCG GAGGCGGGGT TGTCCGACGT GCTGCTTTCG GTGGCGGCGG AAACGGCCCG CGCCTACGCG GAGCTGCGCG GCGCGCAGGC CCGGCTGGAC GTGGCCGAAC GCAACGCCGA GGCCCAGCGG CGCACCCTGG AACTGGTGCG GCTGCGCCGC GACGTGGGCG TGGCCAGCGA CATGAACGTG TTGCAGGCCG AGGCCCAGTT GCAGCGCACC GAGGCCCTGG TGCCCCCGCT GCGCGCCGCA ACCGACGCCG CCATCCACCG GCTGGGCGTG CTGTGCGGCC TGCCCCCGGC GGCACTGCGC GACCGGCTGG CCCCGCGCGC GCCCCTGCCC GCCGTGCCCG ACCTGGTGCC CGTGGGTCTG CCTTCGGACC TTCTGCTGCG CCGTCCGGAC ATCCGCCGGG TGGAGCATGA ACTGCACGCG GCCACGGCGG ACATAGGCCA GCGCGAGGCG GACCTGTTTC CCAAGTTCTC GCTCACCGGA TCGTACGGCC TGAACAGCAT TCATTTTTCC GACCTGTTCC GCGACGACAG CCGCGCCTGG ACCATCATGC CCGGCGTGCG CTGGGCCATC TTCGAGGGGG GGCGCACCCG CGCCGCCGTG GCCGCGTTGG AGGCCCGGCG CGAGGCCACC CTGGAGCGCT GGCGCAAGAC CGTGCTGGTG GCCTTTGAAG AGGTGGAAAC CTCGCTGGCC CGCTATGCCG AAGCGTTCGT GGAGCGCGAG CGGCTGTCCC GCTCGCTGGA GGCGCAGGCC GAGGCCACCC GGCTGGCCAA GGTGCGCTAC ACGGAAGGCG TGGACGACCT GCTGACCGTG CTGGACGCAG AGCGCCGCCA GCTGGAAGTG GAAGAGGCAC TGGCCCGCAG CCGTTCCGGC GTGCTGCTGC ATCTGGTGTC GCTGTACAAG GCCCTGGGGG GCGGCTGGCC CGAGGGAACT GCCATGGCCG GGGCCGATGC GGCGCCGAAT CCGGCGGCCC CTTCGGCCCC TTCACAGGGT GGAGCCGCCG GCGCGGCCTC GCCGCAGTAG
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Protein sequence | MPSGLLATGL MVTVLALSGC AVGPDYDRPA PPAAPTEWSA AKTRPEISGD VSGSGAPAES AGSVAPRAAV SAATPDGQWW ERMGDPQLSE LVAMAVGHNN DALIAAANLR EARAVVGVAR GALLPAAAAG GSFERSRVST NTLTGQSLEM ARMPIESDLY QAGFDARWEI DIFGGARRGV EAARARQQAA EAGLSDVLLS VAAETARAYA ELRGAQARLD VAERNAEAQR RTLELVRLRR DVGVASDMNV LQAEAQLQRT EALVPPLRAA TDAAIHRLGV LCGLPPAALR DRLAPRAPLP AVPDLVPVGL PSDLLLRRPD IRRVEHELHA ATADIGQREA DLFPKFSLTG SYGLNSIHFS DLFRDDSRAW TIMPGVRWAI FEGGRTRAAV AALEARREAT LERWRKTVLV AFEEVETSLA RYAEAFVERE RLSRSLEAQA EATRLAKVRY TEGVDDLLTV LDAERRQLEV EEALARSRSG VLLHLVSLYK ALGGGWPEGT AMAGADAAPN PAAPSAPSQG GAAGAASPQ
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