Gene DvMF_2133 details

Gene Information

• Locus tag: DvMF_2133
• ID: 7174055
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Desulfovibrio vulgaris str. 'Miyazaki F'
• Kingdom: Bacteria
• Replicon accession: NC_011769
• Strand: -
• Start bp: 2655462
• End bp: 2657498
• Gene Length: 2037 bp
• Protein Length: 678 aa
• Translation table: 11
• GC content: 68%
• IMG OID: 643540653
• Product: multi-sensor signal transduction histidine kinase
• Protein accession: YP_002436544
• Protein GI: 218887223
• COG category: [T] Signal transduction mechanisms
• COG ID: [COG5002] Signal transduction histidine kinase
• TIGRFAM ID: [TIGR00229] PAS domain S-box

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 88
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGATGAAAC AGTACTCCCT GCGCAAACGG CTCGTCGTGG GCACCTGGCT GCTGCTGATC 
GTGGCGCTGC TGCCGCCCTA TCTCTATTTC GACAAGACCC TGCGCCGCGA CGTGCTGCTG 
GAGGCCAAGG CCCGCGCCGC CGAAAACGTG GACACCACCT ACTGGCTGCT GCGCGAGCAC 
CCGCGCTTTC CGTCATATCG GCACCTCAAT GCCTGGGTCA CGGAGCTCTC GCGCCGCACC 
GGCACCCGCA TCACCTACAT CGTGGACGGC CACGTGCTGG CCGATTCCGA CGTGCCCTTC 
GAGCGCCTGT CCACGCTGGA GGACCACGCC AACCGACCGG AGGTGGTGGA GGCCCGCACC 
GGCGCGCTGG GCACCGACGT GCGCTTCAGC GCCACACTGG GCAAGGATCT GATCTACGCC 
GCCCGCAAGG TGGACGGCAT AGCCGGGCTG GACCCCGGCA CCCTGCGCCT GGCCCTGCCC 
CTGTCGGTGG TGCACGACCG GCTGGACCGC ATGGAAAAGG GACTGGTGTG GGCCTTCCTG 
TTCTCGCTCA TGGCCAGCGG CGCGCTGGGC CTGGTGGTCA CGCGGCCCCT GCTGCGCGGC 
ATGGAAACCA TGGCCATGGC GGCCCAGGCC ATCGGCCAGG GCGAATACGG ACGCCGCATC 
CGCGACATAC CGGGCCGCGA ACTGCGCCCC CTGGCCCACG CCATCAACGG CATGGCCCAC 
AACATCGAGC AGCACCTGCA CCAGCTGAAC GAACAGAAGG GACGGCTGGA GGCCGTGTTC 
AACGGCATGC ACGAAGGGGT CATGGTGCTG GACGCCACCG GGCGCATCGA ATCCATGAAC 
CGCGCGCTCA CCGCCATGTT CGCGGGCATC GGCAACAAGC TGGGGGCCAC CCCGCTGGAA 
GCCACCATGA AGCCGGAACT GCAGCGCATG GTGGATGAAA TGCTGGTTTC GCCCAACGCG 
CGCGGCACCA GCATGCAGAC CGACCTGGGC GAGGGCCACG CCTTCGAGAT TTCGCTGGTG 
CCCTTTCGCG ATGCCTCTGG CCAGCGCATG GTGCTGGTGT TCCACGATAT CAGCGAGCGC 
GAAAAACTGG AACGCATCCG CCGCGACTTC GTGGCCAACG TCTCGCACGA GCTCAAGACC 
CCGCTCACCA GCATCAAGGG CTACGCCGAA ACGCTGCTGG AAGCGCCGCC CTCGTCGCGC 
GACCAGATGG CCGCCTTCCT GCGCACCATC CTCAAGAACG CCAACCACAT GACCAAGATG 
GTCAACAGCC TGCTGGTGCT GGCCCGCTCG GAGCACAAGG GCGACAAGGT GGCCCTGACA 
GGCGTGGACG CCGCCGAGGT GCTGCGCCAG ACCGTGCGCG AACTGGAACC GGTGGCCACG 
CGCAAGGACA TCGTGCTGGA AAACGGCGTG GGGGCAGGCC CTCTGGTGGT GCTGGCCGAC 
CGCGACGGGC TGGTGGAGGT GTTCCGCAAC CTGCTGGACA ACGCCATCAA GTACAGCCCC 
CCGCAGACGC GGGTGGCCGT TTCCGCCACC GCCGCCGACG GCAGGGTGAC CCTGTGCGTG 
AGCGACCAGG GACCGGGCAT TCCGGAAAAG AGCCGCGAAC GCATCTTCGA ACGATTCTAC 
CGCCTGGACC GCGACGGCGA CGGCACCAAG AACGGCAGCG CGGGACTGGG TCTGGCCATC 
TGCCGCCGCA TCGTCATGAG CCACGGCGGC GACATCTGGG TGGAAAGCCC GCTGGATGCC 
GCCACCCGCA CCGGGGCCGC GTTCTTCGTG ATGCTGTTCT CTCCCCGGCC AGAAGACGAA 
GGCCCGGACG AGAACGGTGC CGGGCTGGAG GATGGTGGTG CGGACGGTAC TGATGCGGAT 
GATGCCGAAC CAAATGATGG CGGACAGGAC GACGACCGAG GCACCCCGGC AGTGCTGCAC 
GCCGCTGCCC GCGCGCCGAA AACGTCCGTG GCCGCGCCCG AGGCAGACGC ATCCGAACCG 
GATGCGCCGC ACGGCGCGGA GAAGGACGGA CCGGGCGGAC CGCCGCGCGG CGCGTGA 

 

Protein sequence

MMKQYSLRKR LVVGTWLLLI VALLPPYLYF DKTLRRDVLL EAKARAAENV DTTYWLLREH 
PRFPSYRHLN AWVTELSRRT GTRITYIVDG HVLADSDVPF ERLSTLEDHA NRPEVVEART 
GALGTDVRFS ATLGKDLIYA ARKVDGIAGL DPGTLRLALP LSVVHDRLDR MEKGLVWAFL 
FSLMASGALG LVVTRPLLRG METMAMAAQA IGQGEYGRRI RDIPGRELRP LAHAINGMAH 
NIEQHLHQLN EQKGRLEAVF NGMHEGVMVL DATGRIESMN RALTAMFAGI GNKLGATPLE 
ATMKPELQRM VDEMLVSPNA RGTSMQTDLG EGHAFEISLV PFRDASGQRM VLVFHDISER 
EKLERIRRDF VANVSHELKT PLTSIKGYAE TLLEAPPSSR DQMAAFLRTI LKNANHMTKM 
VNSLLVLARS EHKGDKVALT GVDAAEVLRQ TVRELEPVAT RKDIVLENGV GAGPLVVLAD 
RDGLVEVFRN LLDNAIKYSP PQTRVAVSAT AADGRVTLCV SDQGPGIPEK SRERIFERFY 
RLDRDGDGTK NGSAGLGLAI CRRIVMSHGG DIWVESPLDA ATRTGAAFFV MLFSPRPEDE 
GPDENGAGLE DGGADGTDAD DAEPNDGGQD DDRGTPAVLH AAARAPKTSV AAPEADASEP 
DAPHGAEKDG PGGPPRGA