Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DvMF_2062 |
Symbol | |
ID | 7173981 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
Kingdom | Bacteria |
Replicon accession | NC_011769 |
Strand | - |
Start bp | 2557436 |
End bp | 2558158 |
Gene Length | 723 bp |
Protein Length | 240 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 643540579 |
Product | ABC transporter related |
Protein accession | YP_002436473 |
Protein GI | 218887152 |
COG category | [V] Defense mechanisms |
COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 84 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCACAG ACCACACCGC CCATACCGGC AGCGCCCCGG CCATCATCGA GGCGTGCGAC CTTTGCAAAA GCTACCCGGC CACCGACGGC GGCGCGCCCG CGCCCGTGCT GCGCGGCGTT TCGCTGCGCG TGTCCCCCGG CGAATTCGTG GCCGTGGCGG GCCGTTCCGG CTCGGGCAAG TCCACGCTGC TCAACGTGCT GGCCTCGCTG ACCCTGCCCG ATTCGGGCAC GGTGCTGTTC GACGGGCAGG ACATCACCCG CGTGTCCGAG GCCCGGCGCA ACCGCCTGCG CCACAGCGAC TTTGCCGTGA TCTTTCAGGC CCACCACCTG ATGCCCTACC TGACCGCGCT GGAAAACGTG CTGCTGCCGT TCATGAACGG TCTTGCACCG GTGCCCGCCG CCATGGCCGA AAAGGGCCGC AGCGTGCTGG ACCGGGTGGG GCTTTCCGGC AAGGCGGCCT CGCTGCCGGG CGCGCTTTCC GGCGGGGAGC AGCAGCGCGT GGCCATTGCC CGTGCACTGG TGCGCGACGC CCGCGTGCTG TTTGCCGACG AACCCACCGG TAGCCTGGAC ACCACCACGG GCGAGGCCAT CATGGAACTG CTGGCCGAAC TTGGCCGCGA CGGCCTGACC ACGGTGATGG TCACCCACAA CCCGGACTAT GCCCGCCGCG CCCACCGTAC CCTGATCATG CGTGACGGCC TGATGGTTGA CGGGCTGGCC TGA
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Protein sequence | MTTDHTAHTG SAPAIIEACD LCKSYPATDG GAPAPVLRGV SLRVSPGEFV AVAGRSGSGK STLLNVLASL TLPDSGTVLF DGQDITRVSE ARRNRLRHSD FAVIFQAHHL MPYLTALENV LLPFMNGLAP VPAAMAEKGR SVLDRVGLSG KAASLPGALS GGEQQRVAIA RALVRDARVL FADEPTGSLD TTTGEAIMEL LAELGRDGLT TVMVTHNPDY ARRAHRTLIM RDGLMVDGLA
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