| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_2048 |
|---|
| Symbol | |
|---|
| ID | 7173967 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011769 |
|---|
| Strand | - |
|---|
| Start bp | 2539423 |
|---|
| End bp | 2540430 |
|---|
| Gene Length | 1008 bp |
|---|
| Protein Length | 335 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 643540565 |
|---|
| Product | NAD-dependent epimerase/dehydratase |
|---|
| Protein accession | YP_002436459 |
|---|
| Protein GI | 218887138 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 84 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCATATTC TCGTCACCGG CGCTGCCGGG TTCATCGGCT ACCATCTTTC GCGCCGCTTT
CTGGAGGCCG GGCACACCGT GGTGGGCCTG GACTGCCTGA ACGACTACTA TGACGTGCAG
CTGAAGAAGG ACCGCCTGAA ACAGCTGGAA CCGTACCCCG GCTTTGCCTT TGCCCAACTG
GACATGGCCG ATGACGCGGG CATGGACGCC CTGTTCGCGG GGCAGAAGTT CACCCACGTG
GTCAACCTGG CCGCCCAGGC CGGGGTGCGC TATTCGCTCA AGAATCCCCG TTCGTACGTC
CAGTCCAACC TGGTGGGCTT CGGCAACATT CTGGAAGGCT GCCGCCACAA CGGCGTGCAG
CACCTGGTGT ATGCCTCGTC CAGTTCCGTC TACGGGCTGA ACACGGCCAT GCCCTTCAGC
GTGCACCACA ACGTGGACCA CCCCATCAGC CTGTACGCCG CGTCCAAAAA GGCCAACGAG
CTGATGGCCC ACACCTACAG CCACCTGTAC CGACTGCCCA CCACGGGCTT GCGCTTCTTT
ACCGTGTACG GGCCTTGGGG CAGGCCGGAC ATGGCCCTGT ACCTGTTCAC CAGGGCCATT
CTGGAAGGGA AGCCCATCAA TGTGTTCAAT GAAGGGCGCA TGCGGCGCGA CTTCACCTAC
ATTGGCGACA TCGTGGAAGG GGTGGTTCGC GTGACCGAGC GCACCCCGCA ACCCAACCCG
GAATGGCGGG GCGATGCGCC GGACCCCTCC ACCAGCCCGG CCCCGTACCG CATCTACAAC
ATCGGCAACA ACAATGCCGT CGAGCTTGGG CGGTTCATAG AGATTCTGGA AGACTGCCTT
GGCCGCAAGG CCGTGCGCAA CCTGATGCCC ATGCAGCCGG GCGACGTGGA AGCCACCTAC
GCCGATGTGG ACGACCTGAT CCGCGATACC GGCTTCAAGC CGCACACGCC GCTGGAGCAG
GGCATAGAGG CGTTCGTGCG CTGGTTCCGC GACTACTACA AGATGTAG
|
|---|
| Protein sequence | MHILVTGAAG FIGYHLSRRF LEAGHTVVGL DCLNDYYDVQ LKKDRLKQLE PYPGFAFAQL
DMADDAGMDA LFAGQKFTHV VNLAAQAGVR YSLKNPRSYV QSNLVGFGNI LEGCRHNGVQ
HLVYASSSSV YGLNTAMPFS VHHNVDHPIS LYAASKKANE LMAHTYSHLY RLPTTGLRFF
TVYGPWGRPD MALYLFTRAI LEGKPINVFN EGRMRRDFTY IGDIVEGVVR VTERTPQPNP
EWRGDAPDPS TSPAPYRIYN IGNNNAVELG RFIEILEDCL GRKAVRNLMP MQPGDVEATY
ADVDDLIRDT GFKPHTPLEQ GIEAFVRWFR DYYKM
|
|---|
| |