| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_2044 |
|---|
| Symbol | |
|---|
| ID | 7173963 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011769 |
|---|
| Strand | - |
|---|
| Start bp | 2535429 |
|---|
| End bp | 2536454 |
|---|
| Gene Length | 1026 bp |
|---|
| Protein Length | 341 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 643540561 |
|---|
| Product | PfkB domain protein |
|---|
| Protein accession | YP_002436455 |
|---|
| Protein GI | 218887134 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG2870] ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase |
|---|
| TIGRFAM ID | [TIGR02198] rfaE bifunctional protein, domain I |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 83 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTCAACT ACAGCATCGA TGGCGCCGCA CTGAGCGCGC TGGTGGCCCG TCTGGCGGGC
GCCCGCGTGT GCGTGGTGGG CGACGTGATG ATCGACGAAT ACCTGGTGGG CGATGCGCAG
CGCATCTCGC CCGAAGCGCC CGTGCCCGTC ATCAGCGTGT CTGAGGACCG CCACCTGGTG
GGCGGCGCGG GCAACGTGGC CAAGAACATC CGTACCCTGG GCGGTGTTCC GCGCCTTGTC
AGCGTGTGCG GCAACGGTCC GCGTTCCGCT CTGCTGCGTC GCGTGCTGCG GGACGAGGGC
GTGGACGCCG CGTTCGTGGA AATTCCGGGA CGGCCCACCA CCCTCAAGAC CCGCGTCATT
GCCCGGCAGC AGCAGATGCT GCGCATAGAC CGCGAGGAAA CCAGCCCCAT CGGCGGCCAG
CACCTGGCCG ATCTGCTGCG GCTGGTGGAT GCGGCCAGCG CCGACTGCAA CGTGGTCATC
GTGTCCGACT ACGGCAAGGG CGTGGTGACC GGCGAGTTCA TGGACGGTCT GGAATCGCTG
TGGGCGCAGC GTGGCACGCG CCCCGCCGTG CTGGTGGACC CCAAGACGCC CAATTTCCAT
CTGTACCGCA ACGTGTTCAT GCCCACGCCC AATGCCAAGG AAACCAGCGA AGGCGCGCAC
CTGCCCACAG GCACCCGCGA GGAAATTCTG GCAGCCGGGC GGGCCATCTT CGACAAGCTG
CACTGCCAGC ACCTGCTGAC CACCCTTGGC TCCAAGGGCA TGGCCCTGTT CGAGGCCGCG
GACAAGGTGT GGCACATCCC CACCACAGCG CGCAGCGTGT TCGACGTTAC CGGTGCCGGG
GATACGGTCA TCGCCACCGT TGCCCTGGCC CTTGCAGCCG GAGTGGGCTT GCTGGAAAGC
TGCGTGCTGG CCAACTACGC CGCGGGCATC GTGGTGGGGC AGGTTGGGGC GGCGTCCGTG
CTGCCGGATG AACTGCGCGA GGCCATCGCC ACCCTGCCGG TGCCGCACGT GGACCGCTGG
GCCTGA
|
|---|
| Protein sequence | MVNYSIDGAA LSALVARLAG ARVCVVGDVM IDEYLVGDAQ RISPEAPVPV ISVSEDRHLV
GGAGNVAKNI RTLGGVPRLV SVCGNGPRSA LLRRVLRDEG VDAAFVEIPG RPTTLKTRVI
ARQQQMLRID REETSPIGGQ HLADLLRLVD AASADCNVVI VSDYGKGVVT GEFMDGLESL
WAQRGTRPAV LVDPKTPNFH LYRNVFMPTP NAKETSEGAH LPTGTREEIL AAGRAIFDKL
HCQHLLTTLG SKGMALFEAA DKVWHIPTTA RSVFDVTGAG DTVIATVALA LAAGVGLLES
CVLANYAAGI VVGQVGAASV LPDELREAIA TLPVPHVDRW A
|
|---|
| |