Gene DvMF_2038 details

Gene Information

• Locus tag: DvMF_2038
• Symbol: aspS
• ID: 7173957
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Desulfovibrio vulgaris str. 'Miyazaki F'
• Kingdom: Bacteria
• Replicon accession: NC_011769
• Strand: +
• Start bp: 2528054
• End bp: 2529898
• Gene Length: 1845 bp
• Protein Length: 614 aa
• Translation table: 11
• GC content: 66%
• IMG OID: 643540555
• Product: aspartyl-tRNA synthetase
• Protein accession: YP_002436449
• Protein GI: 218887128
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0173] Aspartyl-tRNA synthetase
• TIGRFAM ID: [TIGR00459] aspartyl-tRNA synthetase, bacterial type

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 81
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGAGCGATC AGAAACTTGA CGTCCAACAG GAACACCAGC AGTACATCGA ACCCCTGGGC 
GACTGGGTGC GCAGCCACGA TTGCGCCACC CTTACCGCCG CCGACACCGG GGCCGAAGTC 
TGCCTGATGG GCTGGGTACA GTACCGCCGC GACCACGGCG GCCTCATTTT CGTGGACCTG 
CGCGACCGCC AGGGCCTTAC CCAGATCGTG TTCAGCCCAG ACGTCAATCC CGCCGCGCAT 
GAGCGCGCGC ACATCATCCG CTCTGAATAC GTGCTGGCCA TTCGCGGCAC CGTGCGGCCC 
CGGCCCGAGG GCATGACCAA CCCCGGCATG AAGACCGGCG AGATCGAGGT GTACGTTTCC 
GAATGGAAGC TGCTGAACAC CTCCAAGACG CCCGCCTTCG TCATCGAGGA CCGCACCGAG 
GCCAGCGAGA ACCTGCGCCT GCAGTACCGC TACCTCGACC TGCGCCGCCC GCGCATGGCC 
AACAACTTCA TCGTGCGCCA CAAGGCCGCG CAGGCCACCC GCCGCTACCT GGACGAGCTG 
GGCTTTCTCG AGATCGAGAC GCCCTACCTC ACCAAGTCCA CGCCGGAAGG CGCGCGCGAC 
TTTCTGGTGC CCAGCCGCCT GAACCAGGGC CAGTTCTACG CCCTGCCGCA GTCGCCCCAG 
CTGTTCAAAC AATTGCTCAT GATGTCGGGC ATGGAGCGCT ACTACCAGAT CGTGCGCTGC 
TTCCGCGACG AGGACATGCG CGCCGACCGC CAGCTGGAGT TCACCCAGAT CGATATCGAG 
ATGAGCTTCG TGGACGAGGA ACAGGTGATG GCCATGGCCG AAGGCCTGAT GGCCCGCGTG 
TTCCGCGACG CGCTGGACCG CGAGATCGCC ACCCCCTTTC CGCGCATGAG CTATGACGAC 
GCCATGGCCC GCTACGGCGT GGACAAGCCG GACACCCGCT TCGGGCTGGA GCTGCAGGAC 
GTCACGCACA TCGTGCGCGG CTCCAACTTC AAGCTGTTCG CCACGGCGGA GCTGGTCAAG 
GCCATGCGCG TGCCCGGCGG CGAAACCATG ACCCGCAAGG AGATCGACGA ATTCACCGAG 
TTCGTGAAGA TCTACGGCGC GCAGGGCCTG GCCTGGATCA AGATCCGCCC CGACGAATGG 
CAGTCGCCCA TCGCCAAGTT CCTGTCCGAC GAGGAACGCG CCGGGCTGAA GGACGCGCTG 
GGCCTTGAAA CGGGCGACAT CGTGTTCTTC CAGGCGGGCG CGCCGGGCAT GGTCAACGCG 
GCGCTGGGCA ACCTGCGCGT GCGCCTTGGC GAGCACCTGG GCCTCATTGA CGAGAACGCC 
TTCAACTTCC TGTGGGTGAC CGACTTCCCG CTGTTCGAAT ACGACGAGGA AGAAAAGCGC 
TACGTGGCCT GCCACCATCC GTTCACCTCG CCCAAGGACG GCCACATGGA CGTCATGGTC 
GAGAACCCGG CGGCGGCCCG CGCCCGCGCC TACGACATGG TGCTGAACGG CTACGAGCTG 
GGCGGCGGCT CCATCCGCAA CCACACGGCG GAAAAGCAGC GCCGTATGTT CGCGGCACTC 
GGCTTCTCGC CGGAAGAAGC GGAAGCGCAG TTCGGCTTCC TGACCCAGGC GCTGGAAATG 
GGCGCCCCGC CGCACGGCGG CATCGCCTTC GGCATGGACC GTCTGGCCAT GCTGCTGACC 
GGCTCGTCGT CCATCCGCGA TGTCATCGCC TTCCCCAAGA CCCAGAAGGC CACCTGCCTG 
CTCACCCAGG CCCCGGACAG CGTATCCGCC CGCCAACTGC GCGACCTGGG CCTGCGCCTG 
CGCGAAACGG GCAAGGACGG CGCACCCAAC GCTCCGCAGG GCTAG 

 

Protein sequence

MSDQKLDVQQ EHQQYIEPLG DWVRSHDCAT LTAADTGAEV CLMGWVQYRR DHGGLIFVDL 
RDRQGLTQIV FSPDVNPAAH ERAHIIRSEY VLAIRGTVRP RPEGMTNPGM KTGEIEVYVS 
EWKLLNTSKT PAFVIEDRTE ASENLRLQYR YLDLRRPRMA NNFIVRHKAA QATRRYLDEL 
GFLEIETPYL TKSTPEGARD FLVPSRLNQG QFYALPQSPQ LFKQLLMMSG MERYYQIVRC 
FRDEDMRADR QLEFTQIDIE MSFVDEEQVM AMAEGLMARV FRDALDREIA TPFPRMSYDD 
AMARYGVDKP DTRFGLELQD VTHIVRGSNF KLFATAELVK AMRVPGGETM TRKEIDEFTE 
FVKIYGAQGL AWIKIRPDEW QSPIAKFLSD EERAGLKDAL GLETGDIVFF QAGAPGMVNA 
ALGNLRVRLG EHLGLIDENA FNFLWVTDFP LFEYDEEEKR YVACHHPFTS PKDGHMDVMV 
ENPAAARARA YDMVLNGYEL GGGSIRNHTA EKQRRMFAAL GFSPEEAEAQ FGFLTQALEM 
GAPPHGGIAF GMDRLAMLLT GSSSIRDVIA FPKTQKATCL LTQAPDSVSA RQLRDLGLRL 
RETGKDGAPN APQG