Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DvMF_2011 |
Symbol | |
ID | 7173930 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
Kingdom | Bacteria |
Replicon accession | NC_011769 |
Strand | - |
Start bp | 2489985 |
End bp | 2490782 |
Gene Length | 798 bp |
Protein Length | 265 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 643540528 |
Product | RNA polymerase, sigma 28 subunit, FliA/WhiG |
Protein accession | YP_002436422 |
Protein GI | 218887101 |
COG category | [K] Transcription |
COG ID | [COG1191] DNA-directed RNA polymerase specialized sigma subunit |
TIGRFAM ID | [TIGR02479] RNA polymerase sigma factor, FliA/WhiG family [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 106 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAACAT CAAGTTCTTC TGGAAAAAGC TCCTCTTCCG GCACTAACCC CTGGGATGCG CTGGAATCGG GAGCCGTCGC CTGGGGCGAC TTCCCGCGCG GCGACCAGGA ACGGATAGTC CGGCACTACG CGCCCAAGGT GCGGTTTCTG GCCTTGCGCC TGAAGGCCAA GCTGCCCCGC AACGTGGAGC TGAACGAACT GATCAGTGCG GGCACCCTGG GCCTCATGGA GGCGCTGGGC AAGTTCCGTC CCCAGCTTGG CATCCGCTTC GAGACGTATG CCGAAAGCCG CATCCGGGGC GCCATGCTGG ACGAGTTGCG ACGGCTGGAC TGGTTTCCGC GCAGCCTGCG GCAACGGGTG CGGCAACTGG ACGAGGCAAT CCAACGCATC GAGCATGAAA AGGGACGCCA CCCCACCGAG GCGGAATTGC AGGACGCCAC GGGACTGGAC CAGAAGGATG TACGGCTGGG GCTGGAGGCG TTGCAGAACC AGTTGTGTCT CTCGCTCGAC GCCATACAGG ACTCGCTGGC CCCCGATACG GGCGTGCAGG GAGAGGGTGA ACCGTTCCAG ACCACGGCAA CGCAGGAGCT CATAGAGCGG GTGGCGGGGC TGATAGACGA ATTGACACCC CGAGAGAAGC TGGTATTGTC ATTATATTAT AGCGACGAGC TGAACATGCG CGAAACAGCC GAGGTCATGG GCATCACCGA GGGGCGCGTC TCGCAACTGC ACTCCCAGGC GCTCAACAGG CTGCGCAAGG AATTCAGGAA CCACTACGGA GAACACGGCA CCGTCTGA
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Protein sequence | METSSSSGKS SSSGTNPWDA LESGAVAWGD FPRGDQERIV RHYAPKVRFL ALRLKAKLPR NVELNELISA GTLGLMEALG KFRPQLGIRF ETYAESRIRG AMLDELRRLD WFPRSLRQRV RQLDEAIQRI EHEKGRHPTE AELQDATGLD QKDVRLGLEA LQNQLCLSLD AIQDSLAPDT GVQGEGEPFQ TTATQELIER VAGLIDELTP REKLVLSLYY SDELNMRETA EVMGITEGRV SQLHSQALNR LRKEFRNHYG EHGTV
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